Use the latest "augur curate" commands and various other refactoring #7
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Move parameters or "default/*" filepaths to defaults/config.yaml to more easily separate WA-DOH specific parameters
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j23414
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📑 Description
Worked my way through the discussed changes below:
update_curateaugur curateiningest/rules/curate.smk, for example: https://github.com/nextstrain/zika/pull/69/filesscripts/xxx.pyscripts that have been replacedconfigdefaults/config.yamlto more easily separate WA-DOH specific parametersRelated Issue(s)