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fix: explicitly specify how the root and ambiguous states are handled… #3049

fix: explicitly specify how the root and ambiguous states are handled…

fix: explicitly specify how the root and ambiguous states are handled… #3049

Triggered via pull request November 25, 2024 19:53
Status Failure
Total duration 12m 12s
Artifacts 13

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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27 errors and 3 warnings
test (python=3.8 biopython=1.80)
Process completed with exit code 1.
test (python=3.8 biopython=1.82)
The job was canceled because "_3_8_1_80" failed.
test (python=3.8 biopython=1.82)
The operation was canceled.
test (python=3.8 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.8 biopython=latest)
The operation was canceled.
test (python=3.11 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.11 biopython=latest)
The operation was canceled.
test (python=3.11 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.11 biopython=1.80)
The operation was canceled.
test (python=3.12 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.12 biopython=latest)
The operation was canceled.
test (python=3.10 biopython=1.82)
The job was canceled because "_3_8_1_80" failed.
test (python=3.10 biopython=1.82)
The operation was canceled.
test (python=3.10 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.10 biopython=latest)
The operation was canceled.
test (python=3.12 biopython=1.82)
The job was canceled because "_3_8_1_80" failed.
test (python=3.12 biopython=1.82)
The operation was canceled.
test (python=3.9 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=latest)
The operation was canceled.
test (python=3.11 biopython=1.82)
The job was canceled because "_3_8_1_80" failed.
test (python=3.11 biopython=1.82)
The operation was canceled.
test (python=3.9 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=1.80)
The operation was canceled.
test (python=3.9 biopython=1.82)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=1.82)
The operation was canceled.
test (python=3.10 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.10 biopython=1.80)
The operation was canceled.
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-docs
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size
output-avian-flu
96.7 KB
output-dengue
1.33 MB
output-ebola
112 KB
output-lassa
332 KB
output-measles
3.88 MB
output-mpox
12.7 MB
output-mumps
339 KB
output-ncov
709 KB
output-rsv
9.47 MB
output-seasonal-cov
1.55 MB
output-seasonal-flu
53.3 KB
output-tb
5.02 MB
output-zika
750 KB