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Migrate to augur curate #9

Merged
merged 2 commits into from
Jul 17, 2024
Merged

Migrate to augur curate #9

merged 2 commits into from
Jul 17, 2024

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j23414
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@j23414 j23414 commented Jul 15, 2024

Description of proposed changes

Updates the curate rule to use the new augur curate commands.
Updates ingest/vendored to pull in latest changes including nextstrain/ingest#45.

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j23414 added 2 commits July 15, 2024 09:49
Vendored scripts for the curate rule have been ported to `augur curate`
and are available starting from Augur 25.0.0.¹

¹ <https://github.com/nextstrain/augur/releases/tag/25.0.0>
subrepo:
  subdir:   "ingest/vendored"
  merged:   "258ab8c"
upstream:
  origin:   "https://github.com/nextstrain/ingest"
  branch:   "main"
  commit:   "258ab8c"
git-subrepo:
  version:  "0.4.6"
  origin:   "https://github.com/ingydotnet/git-subrepo"
  commit:   "110b9eb"
@j23414 j23414 force-pushed the migrate-to-augur-curate branch from 4d03da6 to 28a6356 Compare July 15, 2024 13:50
@j23414 j23414 requested a review from a team July 17, 2024 13:42
@j23414 j23414 merged commit c04cb16 into master Jul 17, 2024
6 checks passed
@j23414 j23414 deleted the migrate-to-augur-curate branch July 17, 2024 18:25
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2 participants