Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add prM-E build [#15] #18

Merged
merged 1 commit into from
Sep 26, 2024
Merged

Add prM-E build [#15] #18

merged 1 commit into from
Sep 26, 2024

Conversation

genehack
Copy link
Contributor

@genehack genehack commented Aug 29, 2024

Description of proposed changes

Adds a build specific for the prM-E region, which is a frequent sequencing target for yellow fever, analogous to the N450 region of measles.

Preview

Related issue(s)

Closes #15

Checklist

  • Checks pass

Copy link

@joverlee521 joverlee521 left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I'll leave more in-depth scientific review to others. I only left non-blocking suggestions, but overall workflow looks reasonable to me.

phylogenetic/defaults/config.yaml Outdated Show resolved Hide resolved
phylogenetic/rules/export.smk Outdated Show resolved Hide resolved
phylogenetic/defaults/auspice_config_prM-E.json Outdated Show resolved Hide resolved
@genehack genehack merged commit b556680 into main Sep 26, 2024
1 check passed
@genehack genehack deleted the prm-e-build-15 branch September 26, 2024 16:59
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Add prM-E build
2 participants