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fix-linting.yml
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cutadapt needs to be adapted to fit both screening and targeted workflows Fix linting from a comment #77: Issue comment #118 (comment) created by mirpedrol
March 8, 2024 10:37 2s
March 8, 2024 10:37 2s
Add function to pass library.txt into library.fasta and then align Fix linting from a comment #76: Issue comment #103 (comment) created by mirpedrol
February 21, 2024 15:39 3s
February 21, 2024 15:39 3s
Add function to pass library.txt into library.fasta and then align Fix linting from a comment #75: Issue comment #103 (comment) created by mirpedrol
February 21, 2024 15:19 2s
February 21, 2024 15:19 2s
Add function to pass library.txt into library.fasta and then align Fix linting from a comment #74: Issue comment #103 (comment) created by LaurenceKuhl
February 21, 2024 13:49 20s
February 21, 2024 13:49 20s
Add function to pass library.txt into library.fasta and then align Fix linting from a comment #73: Issue comment #103 (comment) created by LaurenceKuhl
February 21, 2024 13:48 3s
February 21, 2024 13:48 3s
Integrate Chronos for screen data Fix linting from a comment #72: Issue comment #112 (comment) created by j-andrews7
February 9, 2024 15:49 3s
February 9, 2024 15:49 3s
Integrate Chronos for screen data Fix linting from a comment #71: Issue comment #112 (comment) created by LaurenceKuhl
February 9, 2024 15:38 3s
February 9, 2024 15:38 3s
Crisprcleanr different input (csv and defined library) Fix linting from a comment #70: Issue comment #109 (comment) created by LaurenceKuhl
February 6, 2024 12:49 3s
February 6, 2024 12:49 3s
Is there a way to specify a common reference genome and run the analysis without protospacer Fix linting from a comment #69: Issue comment #43 (comment) created by mirpedrol
February 5, 2024 17:25 3s
February 5, 2024 17:25 3s
Is there a way to specify a common reference genome and run the analysis without protospacer Fix linting from a comment #68: Issue comment #43 (comment) created by benemead
February 2, 2024 19:09 3s
February 2, 2024 19:09 3s
Fix bagel2 input paths Fix linting from a comment #67: Issue comment #111 (comment) created by LaurenceKuhl
January 31, 2024 10:36 25s
January 31, 2024 10:36 25s
Pass file to cutadapt Fix linting from a comment #66: Issue comment #107 (comment) created by LaurenceKuhl
January 23, 2024 08:20 2s
January 23, 2024 08:20 2s
Important! Template update for nf-core/tools v2.11.1 Fix linting from a comment #65: Issue comment #105 (comment) created by mirpedrol
January 18, 2024 15:48 20s
January 18, 2024 15:48 20s
Pass file to cutadapt Fix linting from a comment #64: Issue comment #107 (comment) created by LaurenceKuhl
January 17, 2024 14:53 3s
January 17, 2024 14:53 3s
Bump to 2.2.0dev Fix linting from a comment #63: Issue comment #102 (comment) created by mirpedrol
January 10, 2024 08:43 2s
January 10, 2024 08:43 2s
Bump to 2.2.0dev Fix linting from a comment #62: Issue comment #102 (comment) created by mirpedrol
January 10, 2024 08:34 27s
January 10, 2024 08:34 27s
Important! Template update for nf-core/tools v2.11.1 Fix linting from a comment #61: Issue comment #105 (comment) created by mirpedrol
December 21, 2023 13:19 26s
December 21, 2023 13:19 26s
Important! Template update for nf-core/tools v2.11 Fix linting from a comment #60: Issue comment #104 (comment) created by nf-core-bot
December 20, 2023 15:55 3s
December 20, 2023 15:55 3s
Add cutadapt Fix linting from a comment #59: Issue comment #95 (comment) created by LaurenceKuhl
November 30, 2023 09:48 21s
November 30, 2023 09:48 21s
example file for --rra_contrasts Fix linting from a comment #58: Issue comment #71 (comment) created by zhouzhendiao
November 20, 2023 02:53 2s
November 20, 2023 02:53 2s
UMI extraction Fix linting from a comment #57: Issue comment #19 (comment) created by mirpedrol
November 17, 2023 13:38 2s
November 17, 2023 13:38 2s
The number of labels (['KO14', 'KO-control']) must be equal to the number of fastq files provided. Fix linting from a comment #56: Issue comment #62 (comment) created by LaurenceKuhl
November 17, 2023 12:52 3s
November 17, 2023 12:52 3s
Add --control-sgrna parameter for megeck count Fix linting from a comment #55: Issue comment #63 (comment) created by LaurenceKuhl
November 17, 2023 12:50 3s
November 17, 2023 12:50 3s
example file for --rra_contrasts Fix linting from a comment #54: Issue comment #71 (comment) created by mirpedrol
November 17, 2023 12:29 2s
November 17, 2023 12:29 2s
template based edits are always zero and way to increase sensitivity Fix linting from a comment #53: Issue comment #72 (comment) created by mirpedrol
November 17, 2023 12:24 2s
November 17, 2023 12:24 2s