FastK has got a -M option to control the memory usage (#3742)

Co-authored-by: Adam Talbot <12817534+adamrtalbot@users.noreply.github.com>
nf-core · Aug 15, 2023 · 29e87a3 · 29e87a3
1 parent b1e9314
commit 29e87a3
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/modules/nf-core/fastk/fastk/main.nf b/modules/nf-core/fastk/fastk/main.nf
@@ -29,6 +29,7 @@ process FASTK_FASTK {
  FastK \\
  $args \\
  -T$task.cpus \\
+ -M${task.memory.toGiga()} \\
  -N${prefix}_fk \\
  $reads