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Add par_regions_bed input to DeepVariant #6022

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merged 3 commits into from
Aug 13, 2024

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fellen31
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Forgot to add this while updating DeepVariant to 1.6.1.

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
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  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
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@fellen31 fellen31 marked this pull request as ready for review July 23, 2024 13:02
@fellen31 fellen31 enabled auto-merge August 12, 2024 10:08
@fellen31 fellen31 added this pull request to the merge queue Aug 13, 2024
@fellen31
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Thanks @SPPearce

Merged via the queue into nf-core:master with commit a7e8b8a Aug 13, 2024
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@fellen31 fellen31 deleted the deepvariant-par-regions branch August 13, 2024 08:28
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3 participants