-
Notifications
You must be signed in to change notification settings - Fork 735
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
ADD CATPACK_DOWNLOAD #7253
base: master
Are you sure you want to change the base?
ADD CATPACK_DOWNLOAD #7253
Conversation
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
You want a review already, right? (Not sure because wrong channel)
Snapshots not passing yet 👀
@@ -42,7 +42,7 @@ output: | |||
description: CSV table with rows as reference genomes, columns samples and entries as log2 PTR | |||
pattern: "*.csv" | |||
ontologies: | |||
- edam: "http://edamontology.org/format_3752" | |||
- edam: "http://edamontology.org/data_3752" |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
- edam: "http://edamontology.org/data_3752" | |
- edam: "http://edamontology.org/format_3752" |
I think you want format
here; with data
the link would be broken.
A real test is not possible because they download >10GBs databases (NCBI Nr or GTDB)
closes #5586
PR checklist
Closes #XXX
versions.yml
file.label
nf-core modules test <MODULE> --profile docker
nf-core modules test <MODULE> --profile singularity
nf-core modules test <MODULE> --profile conda
nf-core subworkflows test <SUBWORKFLOW> --profile docker
nf-core subworkflows test <SUBWORKFLOW> --profile singularity
nf-core subworkflows test <SUBWORKFLOW> --profile conda