Merge pull request #92 from PixelgenTechnologies/chore/minor-doc-fixes

Minor documentation fixes

CHANGELOG.md

@@ -3,14 +3,15 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## [[1.2.0](https://github.com/nf-core/pixelator/releases/tag/1.1.0)] - 2024-05-??
+## [[1.2.0](https://github.com/nf-core/pixelator/releases/tag/1.2.0)] - 2024-05-??
 
 ### Enhancements & fixes
 
 - [[PR #90](https://github.com/nf-core/pixelator/pull/90)] - Update pixelator to 0.17.1
 - [[PR #90](https://github.com/nf-core/pixelator/pull/90)] - Add `pixelator single-cell layout` command
 - [[PR #90](https://github.com/nf-core/pixelator/pull/90)] - The `graph` and `annotate` steps are now using `process_high` as their resource tags
 - [[PR #91](https://github.com/nf-core/pixelator/pull/91)] - Set `process_high` to use 64GB of RAM and `process_high_memory` to use 128GB of RAM
+- [[PR #92](https://github.com/nf-core/pixelator/pull/92)] - Minor touch-ups to the documentation
 
 ### Software dependencies
 

docs/output.md

@@ -168,12 +168,10 @@ newly recovered components are stored in a file (components_recovered.csv).
 - `pixelator`
 
   - `annotate`
-    - `<sample-id>.annotated.dataset.pxl`
+    - `<sample-id>.annotate.dataset.pxl`
     - `<sample-id>.meta.json`: Command invocation metadata.
-    - `<sample-id>.rank_vs_size.png`
-    - `<sample-id>.raw_components_metrics.csv`
+    - `<sample-id>.raw_components_metrics.csv.gz`
     - `<sample-id>.report.json`: Statistics for the analysis step.
-    - `<sample-id>.umap.png`
   - `logs`
     - `<sample-id>.pixelator-annotate.log`: pixelator log output.
     </details>