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Important! Template update for nf-core/tools v2.12 #2173

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Important! Template update for nf-core/tools v2.12

Important! Template update for nf-core/tools v2.12 #2173

Run time

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Job Run time
Run pipeline with test data (23.04.0)
11m 3s
Test STAR RSEM with workflow parameters (--skip_qc)
7m 14s
Run pipeline with test data (latest-everything)
11m 11s
Test HISAT2 with workflow parameters (--skip_qc)
5m 40s
Test STAR Salmon with workflow parameters (--skip_qc)
7m 48s
Test STAR RSEM with workflow parameters (--rsem_index false)
9m 54s
Test STAR Salmon with workflow parameters (--skip_trimming)
10m 3s
Test HISAT2 with workflow parameters (--hisat2_index false)
8m 37s
Test STAR Salmon with workflow parameters (--gtf false)
11m 3s
Test Pseudoaligners with workflow parameters (--pseudo_aligner salmon --skip_qc)
8m 16s
Test STAR Salmon with workflow parameters (--star_index false)
10m 44s
Test Pseudoaligners with workflow parameters (--pseudo_aligner salmon --skip_alignment --skip_pse...
3m 36s
Test Pseudoaligners with workflow parameters (--pseudo_aligner salmon --salmon_index false --tran...
10m 53s
Test STAR Salmon with workflow parameters (--transcript_fasta false)
11m 27s
Test Pseudoaligners with workflow parameters (--pseudo_aligner kallisto --skip_qc)
8m 12s
Test STAR Salmon with workflow parameters (--min_mapped_reads 90)
10m 42s
Test Pseudoaligners with workflow parameters (--pseudo_aligner kallisto --skip_alignment --skip_p...
3m 43s
Test STAR Salmon with workflow parameters (--with_umi)
11m 3s
Test Pseudoaligners with workflow parameters (--pseudo_aligner kallisto --kallisto_index false --...
11m 23s
Test STAR Salmon with workflow parameters (--with_umi --skip_trimming)
10m 51s
Test STAR Salmon with workflow parameters (--remove_ribo_rna --skip_qualimap)
19m 16s
Test STAR Salmon with workflow parameters (--bam_csi_index)
10m 38s
Test STAR Salmon with workflow parameters (--save_align_intermeds --save_reference)
10m 34s
Test STAR Salmon with workflow parameters (--featurecounts_group_type false)
10m 43s
Test STAR Salmon with workflow parameters (--trimmer fastp)
10m 12s
4h 4m 46s