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Null object when running MultiQC #231

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adamrtalbot opened this issue Jun 2, 2023 · 1 comment
Closed

Null object when running MultiQC #231

adamrtalbot opened this issue Jun 2, 2023 · 1 comment
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@adamrtalbot
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Description of the bug

In the full sized tests when using alevin, the MultiQC document failed with a null object. Tower link: https://tower.nf/orgs/nf-core/workspaces/AWSmegatests/watch/4xE2DCsbFu8zSH

Command used and terminal output

nextflow run 'https://github.com/nf-core/scrnaseq' \
		 -name nasty_solvay \
		 -params-file 'https://api.tower.nf/ephemeral/uVeemh1TF0IEjYFHiXLDGQ.json' \
		 -with-tower \
		 -r 6cccb9d37afa873b6799cd09f8589b5b129c8ac1 \
		 -profile test_full,public_aws_ecr

Relevant files

nf-4xE2DCsbFu8zSH.txt
nf-4xE2DCsbFu8zSH.log

System information

scrnaseq: 2.3.1
Nextflow: 23.04.1 build 5866
@adamrtalbot adamrtalbot added the bug Something isn't working label Jun 2, 2023
adamrtalbot added a commit to adamrtalbot/scrnaseq that referenced this issue Jun 13, 2023
@adamrtalbot
Fix issue with multiqc channel trying to access null objects
a51e4b1 
fixes nf-core#231
@adamrtalbot
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Closed with #239

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