feat: Install subworkflows with modules from different remotes #7692
jvfeAnnotations
1 error and 52 warnings
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
Process completed with exit code 1.
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Run pipelines/test_params_file.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_plugin_includes.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_ci.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_create.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_list.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_modules_json.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_awsfulltest.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_awstest.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_template_strings.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_actions_schema_validation.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_merge_markers.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_configs.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_files_unchanged.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_remove.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_nfcore_yml.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_download.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_refgenie.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_version_consistency.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_files_exist.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_create_logo.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_create.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_multiqc_config.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_install.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_info.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_bump_versions.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_lint.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_patch.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_bump_version.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_list.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_create_app.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/lint/test_nextflow_config.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_launch.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_subworkflows.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_test_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_pipelines.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_modules.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_cli.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_lint_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_update.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_info.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_modules_json.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_list.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_create.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_sync.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_remove.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_utils.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run pipelines/test_schema.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_install.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_lint.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run test_components.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Run subworkflows/test_update.py with Python 3.12 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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coverage_modules__test_bump_versions.py
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5.72 KB |
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coverage_modules__test_create.py
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5.66 KB |
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coverage_modules__test_info.py
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5.79 KB |
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coverage_modules__test_install.py
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5.73 KB |
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coverage_modules__test_list.py
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5.78 KB |
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coverage_modules__test_modules_json.py
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5.84 KB |
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coverage_modules__test_patch.py
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5.93 KB |
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coverage_modules__test_remove.py
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5.75 KB |
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coverage_modules__test_update.py
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5.96 KB |
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coverage_pipelines__lint__test_actions_awsfulltest.py
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6.43 KB |
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coverage_pipelines__lint__test_actions_awstest.py
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6.43 KB |
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coverage_pipelines__lint__test_actions_ci.py
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6.43 KB |
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coverage_pipelines__lint__test_actions_schema_validation.py
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6.43 KB |
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coverage_pipelines__lint__test_configs.py
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6.43 KB |
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coverage_pipelines__lint__test_files_exist.py
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6.44 KB |
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coverage_pipelines__lint__test_files_unchanged.py
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6.44 KB |
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coverage_pipelines__lint__test_merge_markers.py
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6.43 KB |
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coverage_pipelines__lint__test_modules_json.py
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6.43 KB |
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coverage_pipelines__lint__test_multiqc_config.py
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6.49 KB |
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coverage_pipelines__lint__test_nextflow_config.py
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6.48 KB |
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coverage_pipelines__lint__test_nfcore_yml.py
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6.43 KB |
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coverage_pipelines__lint__test_plugin_includes.py
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6.42 KB |
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coverage_pipelines__lint__test_template_strings.py
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6.73 KB |
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coverage_pipelines__lint__test_version_consistency.py
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6.49 KB |
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coverage_pipelines__test_bump_version.py
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5.19 KB |
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coverage_pipelines__test_create.py
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5.13 KB |
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coverage_pipelines__test_create_app.py
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5.15 KB |
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coverage_pipelines__test_create_logo.py
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5.15 KB |
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coverage_pipelines__test_download.py
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5.52 KB |
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coverage_pipelines__test_launch.py
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5.31 KB |
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coverage_pipelines__test_lint.py
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6.9 KB |
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coverage_pipelines__test_list.py
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5.04 KB |
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coverage_pipelines__test_params_file.py
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5.2 KB |
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coverage_pipelines__test_refgenie.py
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5.06 KB |
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coverage_pipelines__test_schema.py
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5.24 KB |
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coverage_pipelines__test_sync.py
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5.23 KB |
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coverage_subworkflows__test_create.py
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6.5 KB |
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coverage_subworkflows__test_info.py
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6.59 KB |
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coverage_subworkflows__test_install.py
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6.57 KB |
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coverage_subworkflows__test_lint.py
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6.72 KB |
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coverage_subworkflows__test_list.py
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6.59 KB |
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coverage_subworkflows__test_remove.py
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6.59 KB |
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coverage_subworkflows__test_update.py
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6.7 KB |
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coverage_test_cli.py
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6.86 KB |
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coverage_test_components.py
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5.37 KB |
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coverage_test_lint_utils.py
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5.01 KB |
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coverage_test_modules.py
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5.64 KB |
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coverage_test_pipelines.py
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5.03 KB |
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coverage_test_subworkflows.py
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6.3 KB |
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coverage_test_test_utils.py
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5.02 KB |
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coverage_test_utils.py
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5.18 KB |
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