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Template: test pipeline with conda and singularity on PRs to master #7767

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Template: test pipeline with conda and singularity on PRs to master

Template: test pipeline with conda and singularity on PRs to master #7767

Run time

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Job Run time
Get test file matrix
5s
setup (3.8, ubuntu-latest)
1s
setup (3.12, ubuntu-latest)
1s
setup (3.8, ubuntu-20.04)
1s
Run test_test_utils.py with Python 3.8 on ubuntu-latest
59s
Run test_cli.py with Python 3.8 on ubuntu-latest
53s
Run test_lint_utils.py with Python 3.8 on ubuntu-latest
56s
Run modules/test_remove.py with Python 3.8 on ubuntu-latest
1m 17s
Run modules/test_lint.py with Python 3.8 on ubuntu-latest
4m 52s
Run modules/test_patch.py with Python 3.8 on ubuntu-latest
1m 41s
Run modules/test_list.py with Python 3.8 on ubuntu-latest
1m 45s
Run modules/test_create.py with Python 3.8 on ubuntu-latest
1m 40s
Run modules/test_bump_versions.py with Python 3.8 on ubuntu-latest
1m 18s
Run modules/test_modules_json.py with Python 3.8 on ubuntu-latest
2m 9s
Run modules/test_info.py with Python 3.8 on ubuntu-latest
1m 22s
Run modules/test_update.py with Python 3.8 on ubuntu-latest
3m 2s
Run modules/test_install.py with Python 3.8 on ubuntu-latest
1m 53s
Run test_pipelines.py with Python 3.8 on ubuntu-latest
55s
Run pipelines/test_params_file.py with Python 3.8 on ubuntu-latest
1m 14s
Run pipelines/test_lint.py with Python 3.8 on ubuntu-latest
1m 28s
Run pipelines/test_schema.py with Python 3.8 on ubuntu-latest
2m 44s
Run pipelines/lint/test_files_unchanged.py with Python 3.8 on ubuntu-latest
1m 2s
Run pipelines/lint/test_plugin_includes.py with Python 3.8 on ubuntu-latest
1m 11s
Run pipelines/lint/test_actions_awstest.py with Python 3.8 on ubuntu-latest
1m 0s
Run pipelines/lint/test_merge_markers.py with Python 3.8 on ubuntu-latest
1m 6s
Run pipelines/lint/test_files_exist.py with Python 3.8 on ubuntu-latest
1m 11s
Run pipelines/lint/test_actions_awsfulltest.py with Python 3.8 on ubuntu-latest
59s
Run pipelines/lint/test_nextflow_config.py with Python 3.8 on ubuntu-latest
1m 26s
Run pipelines/lint/test_template_strings.py with Python 3.8 on ubuntu-latest
1m 4s
Run pipelines/lint/test_multiqc_config.py with Python 3.8 on ubuntu-latest
1m 7s
Run pipelines/lint/test_configs.py with Python 3.8 on ubuntu-latest
1m 4s
Run pipelines/lint/test_modules_json.py with Python 3.8 on ubuntu-latest
1m 0s
Run pipelines/lint/test_nfcore_yml.py with Python 3.8 on ubuntu-latest
1m 4s
Run pipelines/lint/test_version_consistency.py with Python 3.8 on ubuntu-latest
59s
Run pipelines/lint/test_actions_ci.py with Python 3.8 on ubuntu-latest
1m 7s
Run pipelines/lint/test_actions_schema_validation.py with Python 3.8 on ubuntu-latest
1m 13s
Run pipelines/test_download.py with Python 3.8 on ubuntu-latest
1m 20s
Run pipelines/test_list.py with Python 3.8 on ubuntu-latest
1m 3s
Run pipelines/test_sync.py with Python 3.8 on ubuntu-latest
1m 35s
Run pipelines/test_create.py with Python 3.8 on ubuntu-latest
1m 5s
Run pipelines/test_create_logo.py with Python 3.8 on ubuntu-latest
1m 19s
Run pipelines/test_launch.py with Python 3.8 on ubuntu-latest
2m 4s
Run pipelines/test_refgenie.py with Python 3.8 on ubuntu-latest
1m 21s
Run pipelines/test_create_app.py with Python 3.8 on ubuntu-latest
1m 57s
Run pipelines/test_bump_version.py with Python 3.8 on ubuntu-latest
1m 6s
Run test_modules.py with Python 3.8 on ubuntu-latest
1m 0s
Run test_components.py with Python 3.8 on ubuntu-latest
12m 9s
Run test_subworkflows.py with Python 3.8 on ubuntu-latest
48s
Run subworkflows/test_remove.py with Python 3.8 on ubuntu-latest
1m 46s
Run subworkflows/test_lint.py with Python 3.8 on ubuntu-latest
2m 21s
Run subworkflows/test_list.py with Python 3.8 on ubuntu-latest
1m 22s
Run subworkflows/test_create.py with Python 3.8 on ubuntu-latest
1m 19s
Run subworkflows/test_info.py with Python 3.8 on ubuntu-latest
1m 14s
Run subworkflows/test_update.py with Python 3.8 on ubuntu-latest
6m 16s
Run subworkflows/test_install.py with Python 3.8 on ubuntu-latest
1m 57s
Run test_utils.py with Python 3.8 on ubuntu-latest
1m 47s
coverage
1m 2s
1h 32m 40s