Allow nf-core pipelines download -r
to download commits
#8419
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2 warnings
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Store snapshot report
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
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Set up job
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
go to subdirectory and change nextflow workdir
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once the workflow run has completed.
Check out source-code repository
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Set up Python 3.8
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Install dependencies
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Downgrade git to the Ubuntu official repository's version
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Set up Singularity
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Get current date
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once the workflow run has completed.
Install Nextflow
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Install nf-test
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
move coveragerc file up
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once the workflow run has completed.
Test with pytest
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
remove slashes from test name
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Store snapshot report
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Upload coverage
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This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Post Install Nextflow
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Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Post Set up Python 3.8
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Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Post Check out source-code repository
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Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Complete job
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Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
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