Hide the hook URL from the command line too

nf-core · Nov 16, 2022 · 23d0d19 · 23d0d19
1 parent 5d00248
commit 23d0d19
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/nf_core/pipeline-template/lib/NfcoreTemplate.groovy b/nf_core/pipeline-template/lib/NfcoreTemplate.groovy
@@ -178,7 +178,7 @@ class NfcoreTemplate {
         msg_fields['exitStatus']   = workflow.exitStatus
         msg_fields['errorMessage'] = (workflow.errorMessage ?: 'None')
         msg_fields['errorReport']  = (workflow.errorReport ?: 'None')
-        msg_fields['commandLine']  = workflow.commandLine
+        msg_fields['commandLine']  = workflow.commandLine.replaceFirst(/ +--hook_url +[^ ]+/, "")
         msg_fields['projectDir']   = workflow.projectDir
         msg_fields['summary']      = summary << misc_fields