Merge pull request #2818 from MillironX/feature/setup-nextflow-v2

Update templates to use nf-core/setup-nextflow v2
nf-core · Mar 7, 2024 · 2dbbce3 · 2dbbce3
2 parents ad4dbb8 + c69268b
commit 2dbbce3
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -4,6 +4,8 @@
 
 ### Template
 
+- Update templates to use nf-core/setup-nextflow v2
+
 ### Linting
 
 ### Components

diff --git a/nf_core/pipeline-template/.github/workflows/ci.yml b/nf_core/pipeline-template/.github/workflows/ci.yml
@@ -31,7 +31,7 @@ jobs:
  uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4
 
  - name: Install Nextflow
- uses: nf-core/setup-nextflow@v1
+ uses: nf-core/setup-nextflow@v2
  with:
  version: "{% raw %}${{ matrix.NXF_VER }}{% endraw %}"
 

diff --git a/nf_core/pipeline-template/.github/workflows/download_pipeline.yml b/nf_core/pipeline-template/.github/workflows/download_pipeline.yml
@@ -28,7 +28,7 @@ jobs:
  runs-on: ubuntu-latest
  steps:
  - name: Install Nextflow
- uses: nf-core/setup-nextflow@v1
+ uses: nf-core/setup-nextflow@v2
 
  - uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # v5
  with:

diff --git a/nf_core/pipeline-template/.github/workflows/linting.yml b/nf_core/pipeline-template/.github/workflows/linting.yml
@@ -35,7 +35,7 @@ jobs:
  uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4
 
  - name: Install Nextflow
- uses: nf-core/setup-nextflow@v1
+ uses: nf-core/setup-nextflow@v2
 
  - uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # v5
  with: