fix MakeTestWorkflow CI tests again

nf-core · Apr 6, 2023 · 3f44849 · 3f44849
1 parent 195ee31
commit 3f44849
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/.github/workflows/create-lint-wf.yml b/.github/workflows/create-lint-wf.yml
@@ -115,6 +115,7 @@ jobs:
 
  - name: nf-core modules remove
  run: |
+ find nf-core-testpipeline/workflows/ -type f -exec sed -i '/^include /d' {} \;
  nf-core --log-file log.txt modules remove fastqc --dir nf-core-testpipeline/
  nf-core --log-file log.txt modules remove multiqc --dir nf-core-testpipeline/
  nf-core --log-file log.txt modules remove custom/dumpsoftwareversions --dir nf-core-testpipeline/