Merge pull request #2323 from mirpedrol/fix-update

don't update modules_json if module is not updated
nf-core · Jun 22, 2023 · 4f32c07 · 4f32c07
2 parents 7b757a7 + fbe8155
commit 4f32c07
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -36,6 +36,8 @@
 
 ### Modules
 
+- Don't update `modules_json` object if a module is not updated ([#2323](https://github.com/nf-core/tools/pull/2323))
+
 ### Subworkflows
 
 ### General

diff --git a/nf_core/components/update.py b/nf_core/components/update.py
@@ -306,16 +306,6 @@ def update(self, component=None, silent=False, updated=None, check_diff_exist=Tr
  # Update linked components
  self.update_linked_components(modules_to_update, subworkflows_to_update, updated)
  self.manage_changes_in_linked_components(component, modules_to_update, subworkflows_to_update)
- else:
- # Don't save to a file, just iteratively update the variable
- self.modules_json.update(
- self.component_type,
- modules_repo,
- component,
- version,
- installed_by=None,
- write_file=False,
- )
 
  if self.save_diff_fn:
  # Write the modules.json diff to the file