catch InvalidGitRepositoryError

nf-core · Jun 13, 2023 · b4e8f82 · b4e8f82
1 parent 202ee4e
commit b4e8f82
Showing 1 changed file with 7 additions and 4 deletions.
diff --git a/nf_core/components/components_test.py b/nf_core/components/components_test.py
@@ -7,7 +7,7 @@
 import pytest
 import questionary
 import rich
-from git import Repo
+from git import InvalidGitRepositoryError, Repo
 
 import nf_core.modules.modules_utils
 import nf_core.utils
@@ -181,9 +181,12 @@ def _run_pytests(self):
         console.rule(self.component_name, style="black")
 
         # Check uncommitted changed
-        repo = Repo(self.dir)
-        if repo.is_dirty():
-            log.warning("You have uncommitted changes. Make sure to commit last changes before running the tests.")
+        try:
+            repo = Repo(self.dir)
+            if repo.is_dirty():
+                log.warning("You have uncommitted changes. Make sure to commit last changes before running the tests.")
+        except InvalidGitRepositoryError:
+            pass
 
         # Set pytest arguments
         tag = self.component_name