Merge pull request #2410 from mirpedrol/bump-version-snap

bump version of nf-test snap files
nf-core · Aug 30, 2023 · ba395fe · ba395fe
2 parents 6e3080b + 5824dd0
commit ba395fe
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -33,6 +33,7 @@
 - Update the Code of Conduct ([#2381](https://github.com/nf-core/tools/pull/2381))
 - Remove `--no-git` option from `nf-core create` ([#2394](https://github.com/nf-core/tools/pull/2394))
 - Throw warning when custom workflow name contains special characters ([#2401](https://github.com/nf-core/tools/pull/2401))
+- Bump version of nf-test snapshot files with `nf-core bump-version` ([#2410](https://github.com/nf-core/tools/pull/2410))
 
 # [v2.9 - Chromium Falcon](https://github.com/nf-core/tools/releases/tag/2.9) + [2023-06-29]
 

diff --git a/nf_core/bump_version.py b/nf_core/bump_version.py
@@ -60,6 +60,20 @@ def bump_pipeline_version(pipeline_obj, new_version):
  ),
  ],
  )
+ # nf-test snap files
+ pipeline_name = pipeline_obj.nf_config.get("manifest.name", "").strip(" '\"")
+ snap_files = [f for f in Path().glob("tests/pipeline/*.snap")]
+ for snap_file in snap_files:
+ update_file_version(
+ snap_file,
+ pipeline_obj,
+ [
+ (
+ f"{pipeline_name}={current_version}",
+ f"{pipeline_name}={new_version}",
+ )
+ ],
+ )
 
 
 def bump_nextflow_version(pipeline_obj, new_version):