You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
When creating a subworkflow using nf-core tools, the entered name is missing from the subworkflow main.nf, the test main.nf and the test test.yml files.
This issue does not seem to occur in module creation.
Command used and terminal output
$ nf-core subworkflows create any_subworkflow ,--./,-. ___ __ __ __ ___ /,-._.--~\ |\ | |__ __ / ` / \ |__) |__ } { | \| | \__, \__/ | \ |___ \`-._,-`-, `._,._,' nf-core/tools version 2.9 - https://nf-co.reINFO Repository type: modules INFO Press enter to use default values (shown in brackets) or type your own responses. ctrl+click underlined text to open links. GitHub Username: (@author): @anoronh4INFO Created / edited following files: ./subworkflows/nf-core/any_subworkflow/main.nf ./subworkflows/nf-core/any_subworkflow/meta.yml ./tests/subworkflows/nf-core/any_subworkflow/main.nf ./tests/subworkflows/nf-core/any_subworkflow/test.yml ./tests/subworkflows/nf-core/any_subworkflow/nextflow.config ./tests/config/pytest_modules.yml
$ cat ./subworkflows/nf-core/any_subworkflow/main.nf | grep ^workflow workflow {
$ cat tests/subworkflows/nf-core/any_subworkflow/test.yml | grep name- name: ""
$ cat tests/subworkflows/nf-core/any_subworkflow/main.nf #!/usr/bin/env nextflownextflow.enable.dsl = 2include { } from '../../../../subworkflows/nf-core//main.nf'workflow test_any_subworkflow { input = file(params.test_data['sarscov2']['illumina']['test_single_end_bam'], checkIfExists: true) ( input )}
### System information
nf-core version 2.9
Python 3.10.8
nextflow version 23.04.2.5870
CentOS7 linux
local executor
HPC
The text was updated successfully, but these errors were encountered:
Description of the bug
When creating a subworkflow using nf-core tools, the entered name is missing from the subworkflow main.nf, the test main.nf and the test test.yml files.
This issue does not seem to occur in module creation.
Command used and terminal output
The text was updated successfully, but these errors were encountered: