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Change remaining parameters from camel_case to snakeCase #427

Merged
merged 5 commits into from
Oct 16, 2019
Merged

Change remaining parameters from camel_case to snakeCase #427

merged 5 commits into from
Oct 16, 2019

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drpatelh
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@drpatelh drpatelh commented Oct 16, 2019 •
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Many thanks to contributing to nf-core/tools!

Please fill in the appropriate checklist below (delete whatever is not relevant). These are the most common things requested on pull requests (PRs).

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated
  • CHANGELOG.md is updated
  • README.md is updated

Learn more about contributing: https://github.com/nf-core/tools/tree/master/.github/CONTRIBUTING.md

  • Change parameter --singleEnd to --single_end
  • Change parameter --igenomesIgnore to --igenomes_ignore
  • Add autoMounts=true to singularity profile
  • Sorted some spacing issues

@drpatelh drpatelh changed the title Change all parameters from snakeCase to camel_case Change remaining parameters from camel_case to snakeCase Oct 16, 2019
@apeltzer apeltzer merged commit a0a72de into nf-core:dev Oct 16, 2019
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@apeltzer apeltzer apeltzer approved these changes

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@drpatelh @apeltzer