相対パスの修正

[emuemuJP]

以下パスの指定に問題がある可能性
https://github.com/oist/optinist/blob/main/optinist/wrappers/lccd_wrapper/lccd_python/blob_detector.py#L9-L10

[itutu-tienday]

@emuemuJP
当件について、再現確認を行ったところ、再現を確認できませんでした。（処理に成功する）

• 環境 … optinist pip module版、version.0.2.1、Widows 11 Native上

上記につき、再現手順を確認させていただきたいと思います。

[ReiHashimoto]

私の方でも再現せずでした。

環境

• optinist: pip版, 0.2.2
• MacOS, 13.3.1, arm64(m2)
• anaconda, 23.1.0

検証ワークフロー

log

pip_lccd.log

[ShogoAkiyama]

こちらに関しては、動く/動かないにせよコードに相対パスが入ってる部分を直したいです。
https://github.com/oist/optinist/blob/main/optinist/wrappers/lccd_wrapper/lccd_python/blob_detector.py#L9-L10

相対パスがあると、呼び出し時にバグる可能性があります。

[itutu-tienday]

（メモ）修正対象箇所は、以下 一定量がある模様。（wrapper配下が主）

optinist/wrappers/init.py(1,1) [UTF-8]: from .caiman_wrapper import caiman_wrapper_dict
optinist/wrappers/init.py(2,1) [UTF-8]: from .suite2p_wrapper import suite2p_wrapper_dict
optinist/wrappers/init.py(3,3) [UTF-8]: # from .dummy_wrapper import dummy_wrapper_dict
optinist/wrappers/init.py(4,1) [UTF-8]: from .optinist_wrapper import optinist_wrapper_dict
optinist/wrappers/init.py(5,1) [UTF-8]: from .lccd_wrapper import lccd_wrapper_dict
optinist/wrappers/caiman_wrapper/init.py(1,1) [UTF-8]: from .motion_correction import caiman_mc
optinist/wrappers/caiman_wrapper/init.py(2,1) [UTF-8]: from .cnmf import caiman_cnmf
optinist/wrappers/dummy_wrapper/init.py(1,1) [UTF-8]: from .dummy import *
optinist/wrappers/lccd_wrapper/lccd_detection.py(8,5) [UTF-8]: from .lccd_python.lccd import LCCD
optinist/wrappers/lccd_wrapper/init.py(1,1) [UTF-8]: from .lccd_detection import lccd_detect
optinist/wrappers/lccd_wrapper/lccd_python/blob_detector.py(9,1) [UTF-8]: from . import oval_filter
optinist/wrappers/lccd_wrapper/lccd_python/blob_detector.py(10,1) [UTF-8]: from .utils import matlab_conv2
optinist/wrappers/lccd_wrapper/lccd_python/lccd.py(7,1) [UTF-8]: from .blob_detector import BlobDetector
optinist/wrappers/lccd_wrapper/lccd_python/lccd.py(8,1) [UTF-8]: from .roi_integration import RoiIntegration
optinist/wrappers/lccd_wrapper/lccd_python/oval_filter.py(5,1) [UTF-8]: from . import utils
optinist/wrappers/lccd_wrapper/lccd_python/roi_integration.py(5,1) [UTF-8]: from . import utils
optinist/wrappers/optinist_wrapper/init.py(1,1) [UTF-8]: from .basic_neural_analysis import basic_neural_analysis_wrapper_dict
optinist/wrappers/optinist_wrapper/init.py(2,1) [UTF-8]: from .dimension_reduction import dimension_reduction_wrapper_dict
optinist/wrappers/optinist_wrapper/init.py(3,1) [UTF-8]: from .neural_population_analysis import neural_population_analysis_wrapper_dict
optinist/wrappers/optinist_wrapper/init.py(4,1) [UTF-8]: from .neural_decoding import neural_decoding_wrapper_dict
optinist/wrappers/optinist_wrapper/basic_neural_analysis/init.py(1,1) [UTF-8]: from .eta import ETA
optinist/wrappers/optinist_wrapper/basic_neural_analysis/init.py(2,3) [UTF-8]: # from .cell_grouping import cell_grouping
optinist/wrappers/optinist_wrapper/dimension_reduction/init.py(1,1) [UTF-8]: from .cca import CCA
optinist/wrappers/optinist_wrapper/dimension_reduction/init.py(2,1) [UTF-8]: from .pca import PCA
optinist/wrappers/optinist_wrapper/dimension_reduction/init.py(3,1) [UTF-8]: from .tsne import TSNE
optinist/wrappers/optinist_wrapper/neural_decoding/init.py(1,1) [UTF-8]: from .glm import GLM
optinist/wrappers/optinist_wrapper/neural_decoding/init.py(2,1) [UTF-8]: from .lda import LDA
optinist/wrappers/optinist_wrapper/neural_decoding/init.py(3,1) [UTF-8]: from .svm import SVM
optinist/wrappers/optinist_wrapper/neural_population_analysis/init.py(1,1) [UTF-8]: from .correlation import correlation
optinist/wrappers/optinist_wrapper/neural_population_analysis/init.py(2,1) [UTF-8]: from .cross_correlation import cross_correlation
optinist/wrappers/optinist_wrapper/neural_population_analysis/init.py(3,1) [UTF-8]: from .granger import Granger
optinist/wrappers/suite2p_wrapper/init.py(1,1) [UTF-8]: from .file_convert import suite2p_file_convert
optinist/wrappers/suite2p_wrapper/init.py(2,1) [UTF-8]: from .registration import suite2p_registration
optinist/wrappers/suite2p_wrapper/init.py(3,1) [UTF-8]: from .roi import suite2p_roi
optinist/wrappers/suite2p_wrapper/init.py(4,1) [UTF-8]: from .spike_deconv import suite2p_spike_deconv
optinist/wrappers/suite2p_wrapper/edit_roi/add_roi.py(4,1) [UTF-8]: from .utils import get_im, get_stat0_add_roi, masks_and_traces, save_json_data
optinist/wrappers/suite2p_wrapper/edit_roi/delete_roi.py(3,1) [UTF-8]: from .utils import get_im, save_json_data
optinist/wrappers/suite2p_wrapper/edit_roi/merge_roi.py(3,1) [UTF-8]: from .utils import get_im, save_json_data
optinist/wrappers/suite2p_wrapper/edit_roi/init.py(1,1) [UTF-8]: from .add_roi import execute_add_ROI
optinist/wrappers/suite2p_wrapper/edit_roi/init.py(2,1) [UTF-8]: from .merge_roi import execute_merge_roi
optinist/wrappers/suite2p_wrapper/edit_roi/init.py(3,1) [UTF-8]: from .delete_roi import excute_delete_roi