Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

feat(credible set qc dag): added dag and docs #59

Merged
merged 1 commit into from
Oct 25, 2024

Conversation

project-defiant
Copy link
Collaborator

Context

We want to deduplicate and repartiiton the credible sets coming from two sources:

  • 'gs://gwas_catalog_sumstats_susie/credible_set_datasets` ~ 300k Loci files
  • gs://ukb_ppp_eur_data/credible_set_datasets/susie ~ 17k loci files

Implementations

Based on the opentargets/gentropy#880 this PR introduces the DAG to perform the QC steps on both datasets described above

Also the documentation is adjusted to the new outputs.

@project-defiant project-defiant marked this pull request as ready for review October 25, 2024 17:07
@project-defiant project-defiant merged commit 1a4a537 into dev Oct 25, 2024
2 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants