Repositories list

• radx-data-hub-metadata

  Public
  Collection of metadata entities in the RADx Data Hub

  0•0•0•0•Updated Jan 29, 2025Jan 29, 2025

• cde-counter

  Public
  Script to count variables used in RADx studies.

  Python

  •0•0•0•0•Updated Dec 18, 2024Dec 18, 2024

• radx-file-metadata-specification

  Public
  A repository to track issues with the RADx file metadata specification

  0•0•0•0•Updated Dec 17, 2024Dec 17, 2024

• radx-metadata-validator

  Public
  Java

  •

  Other

  •0•0•0•0•Updated Dec 16, 2024Dec 16, 2024

• study-distribution-charts

  Public
  A repository for scripts to generate study distribution visualizations of the RADx Data Hub

  Jupyter Notebook

  •0•0•0•0•Updated Dec 16, 2024Dec 16, 2024

• study-descriptions

  Public
  0•0•0•0•Updated Dec 6, 2024Dec 6, 2024

• dhmo

  Public
  Makefile

  •0•0•5•0•Updated Nov 6, 2024Nov 6, 2024

• radx-data-dictionary-printer

  Public
  Java

  •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

• content-analysis

  Public
  A repository for scripts and tools to generate visualizations and perform data analysis on content from the RADx Data Hub

  R

  •0•0•0•0•Updated Oct 25, 2024Oct 25, 2024

• radx-rad-metadata-compiler

  Public
  Transform RADx-rad CSV metadata files into the JSON-LD metadata format for upload to the Data Hub

  Java

  •

  Other

  •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

• gcbo

  Public
  Makefile

  •

  BSD 2-Clause "Simplified" License

  •0•0•1•1•Updated Oct 3, 2024Oct 3, 2024

• radx-data-dictionary-specification

  Public
  A specification for CSV data dictionaries in the RADx data hub

  BSD 2-Clause "Simplified" License

  •2•0•2•0•Updated Sep 25, 2024Sep 25, 2024

• recap-data-dictionary-converter

  Public
  Code to convert a REDCap data dictionary into a RADx Data Dictionary

  BSD 2-Clause "Simplified" License

  •0•0•0•0•Updated Sep 22, 2024Sep 22, 2024

• radx-data-dictionary-validator

  Public
  A validator for radx data dictionaries

  Java

  •

  BSD 2-Clause "Simplified" License

  •0•0•0•0•Updated Sep 17, 2024Sep 17, 2024

• cedar-cli

  Public
  A command line tool for CEDAR (cedar.metadatacenter.org)

  Java

  •

  BSD 2-Clause "Simplified" License

  •0•0•1•0•Updated Sep 12, 2024Sep 12, 2024

• gdmt

  Public
  A repo to house a version of the Generic Dataset Metadata Template SKOS vocabulary

  0•0•4•0•Updated Sep 10, 2024Sep 10, 2024

• harmonization-metrics

  Public
  Java

  •

  BSD 2-Clause "Simplified" License

  •0•0•0•0•Updated Sep 10, 2024Sep 10, 2024

• cedar-template-github-pipeline

  Public
  This pipeline documents resources of RADx Metadata Specifications.

  JavaScript

  •

  Other

  •0•0•0•0•Updated Aug 15, 2024Aug 15, 2024

• radx-reporter

  Public
  XA4.1: Statistics on the contents of the RADx Data Hub

  Python

  •

  Other

  •0•0•0•0•Updated Aug 7, 2024Aug 7, 2024

• cedar-nih-tools

  Public
  Tool for ingesting NIH CDEs

  Java

  •

  Other

  •0•0•0•0•Updated Aug 7, 2024Aug 7, 2024

• cde-converter

  Public
  Kotlin

  •

  Other

  •0•0•0•0•Updated Aug 7, 2024Aug 7, 2024

• radx-ontology-workflows

  Public
  Makefile

  •0•0•4•0•Updated Jul 30, 2024Jul 30, 2024

• radx-study-analysis-vocab

  Public
  Makefile

  •

  BSD 2-Clause "Simplified" License

  •0•0•4•0•Updated May 24, 2024May 24, 2024

• w3id.org

  Public
  Website source code for w3id.org.

  HTML

  •1.3k•0•0•0•Updated May 1, 2024May 1, 2024

• radx-dict2ont

  Public
  Generates an ontology from a RADx Data Dictionary

  Java

  •0•0•0•0•Updated Mar 2, 2024Mar 2, 2024

• radx-tier2-data-elements

  Public
  A repository for keeping track of RADx Tier 2 data elements

  0•0•0•0•Updated Nov 1, 2023Nov 1, 2023

• radx-datahub-ontology

  Public
  An ontology that conceptually describes the arrangement and meaning of data in the RADx datahub

  BSD 2-Clause "Simplified" License

  •0•0•0•0•Updated Oct 31, 2023Oct 31, 2023

• radx-missing-value-reasons

  Public
  This is a fork of the @graybealski repo for RADx missing value reasons

  BSD 3-Clause "New" or "Revised" License

  •13•0•0•0•Updated Oct 24, 2023Oct 24, 2023

• radx-project

  Public
  This repo serves as a primary location for tracking issues that don't quite fit into our other dedicated repositories

  0•0•119•0•Updated Sep 21, 2023Sep 21, 2023

• radx-study-tracker-cli

  Public
  An API and model for information contained in the RADx Study/Project tracker

  Java

  •

  BSD 2-Clause "Simplified" License

  •0•0•0•0•Updated Aug 7, 2023Aug 7, 2023