CI against Python 3.12

.github/workflows/unittests.yml

@@ -24,16 +24,16 @@ jobs:
       matrix:
         os: [ubuntu-latest]
         environment-file:
-          - ci/38-minimal.yaml
-          - ci/39.yaml
+          - ci/310-minimal.yaml
           - ci/310.yaml
           - ci/311.yaml
-          - ci/311-dev.yaml
-          - ci/311-no-optional.yaml
+          - ci/312.yaml
+          - ci/312-dev.yaml
+          - ci/312-no-optional.yaml
         include:
-          - environment-file: ci/310.yaml
+          - environment-file: ci/312.yaml
             os: macos-latest
-          - environment-file: ci/310.yaml
+          - environment-file: ci/312.yaml
             os: windows-latest
     defaults:
       run:

.pre-commit-config.yaml

@@ -1,6 +1,6 @@
 repos: 
 - repo: https://github.com/psf/black
-  rev: 23.9.1
+  rev: "23.10.0"
   hooks:
   - id: black
     language_version: python3

README.rst

@@ -5,7 +5,7 @@ Python Spatial Analysis Library Core
 .. image:: https://github.com/pysal/libpysal/workflows/.github/workflows/unittests.yml/badge.svg
     :target: https://github.com/pysal/libpysal/actions?query=workflow%3A.github%2Fworkflows%2Funittests.yml
 
-.. image:: https://codecov.io/gh/pysal/libpysal/branch/master/graph/badge.svg
+.. image:: https://codecov.io/gh/pysal/libpysal/branch/main/graph/badge.svg
     :target: https://codecov.io/gh/pysal/libpysal
 
 .. image:: https://badge.fury.io/py/libpysal.svg
@@ -59,7 +59,7 @@ If you have any suggestions, feature requests, or bug reports,
 please open new `issues <https://github.com/pysal/libpysal/issues>`_ on GitHub. 
 To submit patches, please review `PySAL's documentation for developers <https://pysal.org/docs/devs/>`_, 
 the PySAL `development guidelines <https://github.com/pysal/pysal/wiki>`_, 
-the `libpysal contributing guidelines <https://github.com/pysal/libpysal/blob/master/.github/CONTRIBUTING.md>`_
+the `libpysal contributing guidelines <https://github.com/pysal/libpysal/blob/main/.github/CONTRIBUTING.md>`_
 before  opening a `pull request <https://github.com/pysal/libpysal/pulls>`_. 
 Once your changes get merged, you’ll automatically be added to 
 the `Contributors List <https://github.com/pysal/libpysal/graphs/contributors>`_.
@@ -76,6 +76,6 @@ To search for or report bugs, please see `libpysal's issues <https://github.com/
 License information
 *******************
 
-See the `LICENSE <https://github.com/pysal/libpysal/blob/master/LICENSE.txt>`_
+See the `LICENSE <https://github.com/pysal/libpysal/blob/main/LICENSE.txt>`_
 for information on the history of this software, terms & conditions for usage,
 and a DISCLAIMER OF ALL WARRANTIES.

ci/38-minimal.yaml → ci/310-minimal.yaml

@@ -2,7 +2,7 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.8
+  - python=3.10
   - beautifulsoup4=4.10
   - jinja2=3.0
   - pandas=1.4

ci/311-dev.yaml → ci/312-dev.yaml

@@ -2,7 +2,7 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.11
+  - python=3.12
   - platformdirs
   - beautifulsoup4
   - jinja2

ci/311-no-optional.yaml → ci/312-no-optional.yaml

@@ -2,7 +2,7 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.11
+  - python=3.12
   - platformdirs
   - beautifulsoup4
   - jinja2

ci/39.yaml → ci/312.yaml

@@ -2,7 +2,7 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.9
+  - python=3.12
   - platformdirs
   - beautifulsoup4
   - jinja2
@@ -16,11 +16,12 @@ dependencies:
   - pytest-cov
   - pytest-xdist
   # optional
-  - geopandas
+  - geopandas>=0.12.0
   - joblib
   - networkx
-  - numba
   - packaging
+  - shapely>=2.0b1
+  - xarray
   - zstd
   - geodatasets
   - pyarrow

docs/conf.py

@@ -279,7 +279,7 @@ def setup(app):
     "networkx": ("https://networkx.org/documentation/stable/", None),
     "numpy": ("https://numpy.org/doc/stable/", None),
     "pandas": ("https://pandas.pydata.org/pandas-docs/stable/", None),
-    "python": ("https://docs.python.org/3.11/", None),
+    "python": ("https://docs.python.org/3.12/", None),
     "scipy": ("https://docs.scipy.org/doc/scipy/", None),
 }
 

docs/index.rst

@@ -19,7 +19,7 @@ libpysal: Python Spatial Analysis Library Core
         <div class="col-sm-1 col-xs-hidden">
         </div>
         <div class="col-sm-10 col-xs-12">
-            <a href="http://nbviewer.jupyter.org/github/pysal/libpysal/blob/master/notebooks/weights.ipynb" class="thumbnail">
+            <a href="http://nbviewer.jupyter.org/github/pysal/libpysal/blob/main/notebooks/weights.ipynb" class="thumbnail">
                 <img src="_static/images/npweights.png" class="img-responsive center-block">
                 <div class="caption text-center">
                 <h6>Weights for nonplanar enforced geometries</h6>
@@ -38,10 +38,10 @@ Introduction
 
 **libpysal** offers four modules that form the building blocks in many upstream packages in the `PySAL family <https://pysal.org>`_:
 
-- Spatial Weights: libpysal.weights 
-- Input-and output: libpysal.io 
-- Computational geometry: libpysal.cg  
-- Built-in example datasets libpysal.examples  
+- Spatial Weights: libpysal.weights
+- Input-and output: libpysal.io
+- Computational geometry: libpysal.cg
+- Built-in example datasets libpysal.examples
 
 
 Examples demonstrating some of **libpysal** functionality are available in the `tutorial <tutorial.html>`_.

pyproject.toml

@@ -23,7 +23,7 @@ classifiers = [
     "Intended Audience :: Science/Research",
     "Topic :: Scientific/Engineering :: GIS",
 ]
-requires-python = ">=3.8"
+requires-python = ">=3.10"
 dependencies = [
     "platformdirs>=2.0.2",
     "beautifulsoup4>=4.10",
@@ -76,7 +76,7 @@ line-length = 88
 [tool.ruff]
 line-length = 88
 select = ["E", "F", "W", "I", "UP", "N", "B", "A", "C4", "SIM", "ARG"]
-target-version = "py38"
+target-version = "py310"
 ignore = [
     "B006",
     "B008",