adding tutorial

[mhajij]

adding DeepCell tutorial and fixing some docstring, making it more clear

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Codecov Report

All modified lines are covered by tests ✅

Comparison is base (ba7a91e) 90.47% compared to head (ffbcc48) 90.47%.

Additional details and impacted files

@@           Coverage Diff           @@
##             main      #26   +/-   ##
=======================================
  Coverage   90.47%   90.47%           
=======================================
  Files           7        7           
  Lines         105      105           
=======================================
  Hits           95       95           
  Misses         10       10           

Files	Coverage Δ
topoembedx/classes/cell2vec.py	100.00% <ø> (ø)
topoembedx/classes/cell_diff2vec.py	58.82% <ø> (ø)
topoembedx/classes/deepcell.py	100.00% <ø> (ø)
...embedx/classes/higher_order_laplacian_eigenmaps.py	100.00% <ø> (ø)
topoembedx/classes/hoglee.py	100.00% <ø> (ø)
topoembedx/neighborhood.py	75.00% <100.00%> (ø)

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[ninamiolane]

Some typos: e.g. parmater
DeepCell.ipynb --> deepcell.ipynb to respect python guidelines in naming files.

[mhajij]

@ninamiolane lint is failing in the tutorial should we disable that there or what actions do you recommend ?

[ninamiolane]

@mhajij run black . in your command line.

[ninamiolane]

Wow, the tutorial is awesome!! Thanks!

[gurug-dev]

this PR also includes fixes for #23.