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Ignore deleted outputs in default workflows #3172

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Merged
merged 3 commits into from
Feb 16, 2022
Merged

Ignore deleted outputs in default workflows #3172

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7d4bfe1
ignore deleted outputs jobs from default workflows
antgonza Jan 26, 2022
dae534f
flake8
antgonza Jan 26, 2022
7d41a34
Merge branch 'dev' of github.com:biocore/qiita into ignore-deleted-ou…
antgonza Feb 1, 2022
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7 changes: 6 additions & 1 deletion qiita_db/metadata_template/prep_template.py
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Original file line number Diff line number Diff line change
Expand Up @@ -800,7 +800,12 @@ def _get_predecessors(workflow, node):
merging_schemes = {
qdb.archive.Archive.get_merging_scheme_from_job(j): {
x: y.id for x, y in j.outputs.items()}
for j in prep_jobs if j.status == 'success' and not j.hidden}
# we are going to select only the jobs that were a 'success', that
# are not 'hidden' and that have an output - jobs that are not
# hidden and a successs but that do not have outputs are jobs which
# resulting artifacts (outputs) were deleted
for j in prep_jobs if j.status == 'success' and not j.hidden
and j.outputs}

# 2.
pt_dt = self.data_type()
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