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Issues: r2dt-bio/R2DT

Checklist for release 2.1
#150 opened Oct 1, 2024 by AntonPetrov
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Issues list

Add --rotate option
#167 opened Dec 12, 2024 by AntonPetrov
Add an option to use 3D-faithful layouts like RNAscape or RNAview when 3D is available
#166 opened Dec 5, 2024 by AntonPetrov
Input sequence names identical to sequence name in Rfam alignment will cause R2DT to fail
#161 opened Nov 15, 2024 by nawrockie
Add domain labels to templates
#160 opened Nov 15, 2024 by AntonPetrov
6
Refactor the core visualise function
#159 opened Nov 15, 2024 by AntonPetrov
@AntonPetrov
Improve visibility of numbering labels and numbering lines
#158 opened Oct 31, 2024 by AntonPetrov
Make sure editors support pseudoknots
#154 opened Oct 10, 2024 by AntonPetrov
Add a wrapper command for enrich_json and json2svg
#153 opened Oct 10, 2024 by AntonPetrov
Prevent tRNAs from matching non-tRNA Rfam models bug Something isn't working
#152 opened Oct 10, 2024 by AntonPetrov
@AntonPetrov
Do not require users to install precomputed library
#151 opened Oct 3, 2024 by AntonPetrov
@AntonPetrov
Checklist for release 2.1
#150 opened Oct 1, 2024 by AntonPetrov
12 tasks
Improve installation process
#147 opened Aug 25, 2024 by AntonPetrov
Create animated 2Ds showing transition between 2D structures from PDB files new feature
#146 opened Aug 23, 2024 by AntonPetrov
Use RiboCentre diagrams as templates
#143 opened Aug 21, 2024 by AntonPetrov
Use Typer and Rich
#133 opened Dec 8, 2023 by AntonPetrov
Switch to relative coordinates
#131 opened Dec 8, 2023 by AntonPetrov
1
6
Improve thumbnail images
#130 opened Dec 8, 2023 by AntonPetrov
Update Traveler to latest version
#128 opened Nov 29, 2023 by AntonPetrov
1
@AntonPetrov
Improve handling of sequences with MultipleHits warnings
#125 opened Nov 9, 2023 by AntonPetrov
@AntonPetrov
Switch to Python API where possible good first issue Good for newcomers
#113 opened Oct 9, 2023 by AntonPetrov
Integrate with RNAFramework new feature
#108 opened Sep 25, 2023 by AntonPetrov
Include name in json schema output enhancement New feature or request
#100 opened May 24, 2023 by AntonPetrov
@AntonPetrov
Models missing in R2DT v1.3 cms
#99 opened Feb 1, 2023 by afg1
@AntonPetrov
1
Use alignments from tRNAscan-SE without re-creating them in R2DT
#98 opened Dec 3, 2022 by patriciaplchan
Use --detail option with tRNAscan-SE
#97 opened Dec 3, 2022 by patriciaplchan
@AntonPetrov
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