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Loosen same-group permissions for folders and logs #189

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merged 1 commit into from
Jan 2, 2024
Merged

Loosen same-group permissions for folders and logs #189

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3 changes: 3 additions & 0 deletions aviary/modules/Snakefile
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Original file line number Diff line number Diff line change
Expand Up @@ -2,9 +2,11 @@
# ruleorder: filtlong_no_reference > link_reads

onsuccess:
shell("chmod g+w {log}")
print("Aviary finished, no error")

onerror:
shell("chmod g+w {log}")
print("An error occurred")

onstart:
Expand Down Expand Up @@ -44,6 +46,7 @@ onstart:
from snakemake.utils import min_version
import os
min_version("6.0")
os.umask(0o002)

module qc:
snakefile: "quality_control/qc.smk"
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