Add more tests for filtering mutations, more specific var-type options, option for controlling number of parallel threads (--jobs)#14

Merged

denisbeslic merged 11 commits intodevelopfrom

feature/moretests

Jun 10, 2022

Commits on Jun 2, 2022

Test and fail on missing columns, duplicate ids. Use regex for dna subs, indel matching.
matthuska
committed
Allow the user to set the number of threads (--jobs) OpenMP uses
matthuska
committed

Commits on Jun 3, 2022

More specific var-type (for covsonar vs nextclade differences). Regexes for all. Need to test everything that's not 'covsonar_dna'
matthuska
committed

Commits on Jun 7, 2022

Document --jobs parameter and new --var-type's for program-specific mutation parsers
matthuska
committed

Commits on Jun 10, 2022