Fix SAGE_FAT_BINARY regression for numpy ("Ignoring --build-option when building numpy using PEP 517")

[mkoeppe]

Seen in https://github.com/sagemath/sage-prod/files/10659599/numpy-1.21.4.log

The change made as part of #32046, using pip wheel --build-option ... (instead of setup.py bdist_wheel...) seems to have broken the use of said build options when the package is a PEP 517 package (i.e., has pyproject.toml)

Among the packages found by git grep sdh_prefix, only numpy is
affected (the others, python_igraph, jupyter_jsmol, pillow, do not have pyproject.toml).

The build options for numpy are in particular needed for SAGE_FAT_BINARY=yes builds. This would explain the segfaults (again!) in the multi-stage Cygwin build, triggered by plots in doctests - https://github.com/sagemath/sage/runs/4768915607?check_suite_focus=true

(Hence "blocker" for Sage 9.5.)

Also fixes a build problem on alpine-standard (#33083)

CC: @dimpase @kliem @jhpalmieri @culler

Component: packages: standard

Author: Matthias Koeppe

Branch: 455e1fa

Reviewer: Dima Pasechnik

Issue created by migration from https://trac.sagemath.org/ticket/33138

[mkoeppe]

Branch: u/mkoeppe/ignoring___build_option_when_building_numpy_using_pep_517

[mkoeppe]

New commits:

455e1fa

build/pkgs/numpy/spkg-install.in: Use pip wheel --no-use-pep517

[mkoeppe]

Commit: 455e1fa

[mkoeppe]

Author: Matthias Koeppe

[dimpase]

comment:5

see #33083 comment:45 - it throws an error, saying that
setup.py clean is not supported.
(this is actually a by-product of a failing build)

[dimpase]

Reviewer: Dima Pasechnik

[dimpase]

comment:8

OK, assuming the inability to build on Alpine in lxc (as reported on #33083) has nothing to do with this.

[mkoeppe]

comment:9

Thanks.

[vbraun]

Changed branch from u/mkoeppe/ignoring___build_option_when_building_numpy_using_pep_517 to 455e1fa

[mkoeppe]

Changed commit from 455e1fa to none

[mkoeppe]

Replying to @mkoeppe:

Among the packages found by git grep sdh_prefix, only numpy is
affected (the others, python_igraph, jupyter_jsmol, pillow, do not have pyproject.toml).

Follow-up for these packages in #34430, #34421, #34433.