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Make # abs tol compare over the complex numbers #38433

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14 changes: 13 additions & 1 deletion pkgs/sagemath-categories/known-test-failures.json
Original file line number Diff line number Diff line change
Expand Up @@ -807,6 +807,10 @@
"failed": true,
"ntests": 0
},
"sage.doctest.check_tolerance": {
"failed": true,
"ntests": 19
},
"sage.doctest.control": {
"failed": true,
"ntests": 230
Expand All @@ -821,13 +825,21 @@
"failed": true,
"ntests": 413
},
"sage.doctest.marked_output": {
"failed": true,
"ntests": 21
},
"sage.doctest.parsing": {
"failed": true,
"ntests": 313
"ntests": 275
},
"sage.doctest.reporting": {
"ntests": 115
},
"sage.doctest.rif_tol": {
"failed": true,
"ntests": 18
},
"sage.doctest.sources": {
"failed": true,
"ntests": 343
Expand Down
259 changes: 259 additions & 0 deletions src/sage/doctest/check_tolerance.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,259 @@
# sage_setup: distribution = sagemath-repl
"""
Check tolerance when parsing docstrings
"""

# ****************************************************************************
# Copyright (C) 2012-2018 David Roe <roed.math@gmail.com>
# 2012 Robert Bradshaw <robertwb@gmail.com>
# 2012 William Stein <wstein@gmail.com>
# 2013 R. Andrew Ohana
# 2013 Volker Braun
# 2013-2018 Jeroen Demeyer <jdemeyer@cage.ugent.be>
# 2016-2021 Frédéric Chapoton
# 2017-2018 Erik M. Bray
# 2020 Marc Mezzarobba
# 2020-2023 Matthias Koeppe
# 2022 John H. Palmieri
# 2022 Sébastien Labbé
# 2023 Kwankyu Lee
#
# Distributed under the terms of the GNU General Public License (GPL)
# as published by the Free Software Foundation; either version 2 of
# the License, or (at your option) any later version.
# https://www.gnu.org/licenses/
# ****************************************************************************

import re
from sage.doctest.rif_tol import RIFtol, add_tolerance
from sage.doctest.marked_output import MarkedOutput


# Regex pattern for float without the (optional) leading sign
float_without_sign = r'((\d*\.?\d+)|(\d+\.?))([eE][+-]?\d+)?'


# Regular expression for floats
float_regex = re.compile(r'\s*([+-]?\s*' + float_without_sign + r')')


class ToleranceExceededError(BaseException):
pass


def check_tolerance_real_domain(want: MarkedOutput, got: str) -> tuple[str, str]:
"""
Compare want and got over real domain with tolerance

INPUT:

- ``want`` -- a string, what you want
- ``got`` -- a string, what you got

OUTPUT:

The strings to compare, but with matching float numbers replaced by asterisk.

EXAMPLES::

sage: from sage.doctest.check_tolerance import check_tolerance_real_domain
sage: from sage.doctest.marked_output import MarkedOutput
sage: check_tolerance_real_domain(
....: MarkedOutput('foo:0.2').update(abs_tol=0.3),
....: 'bar:0.4')
['foo:*', 'bar:*']
sage: check_tolerance_real_domain(
....: MarkedOutput('foo:0.2').update(abs_tol=0.3),
....: 'bar:0.6')
Traceback (most recent call last):
...
sage.doctest.check_tolerance.ToleranceExceededError
"""
# First check that the number of occurrences of floats appearing match
want_str = [g[0] for g in float_regex.findall(want)]
got_str = [g[0] for g in float_regex.findall(got)]
if len(want_str) != len(got_str):
raise ToleranceExceededError()

# Then check the numbers
want_values = [RIFtol(g) for g in want_str]
want_intervals = [add_tolerance(v, want) for v in want_values]
got_values = [RIFtol(g) for g in got_str]
# The doctest is not successful if one of the "want" and "got"
# intervals have an empty intersection
if not all(a.overlaps(b) for a, b in zip(want_intervals, got_values)):
raise ToleranceExceededError()

# Then check the part of the doctests without the numbers
# Continue the check process with floats replaced by stars
want = float_regex.sub('*', want)
got = float_regex.sub('*', got)
return [want, got]


# match 1.0 or 1.0 + I or 1.0 + 2.0*I
real_plus_optional_imag = ''.join([
r'\s*(?P<real>[+-]?\s*',
float_without_sign,
r')(\s*(?P<real_imag_coeff>[+-]\s*',
float_without_sign,
r')\*I|\s*(?P<real_imag_unit>[+-])\s*I)?',
])


# match - 2.0*I
only_imag = ''.join([
r'\s*(?P<only_imag>[+-]?\s*',
float_without_sign,
r')\*I',
])


# match I or -I (no digits), require a non-word part before and after for specificity
imaginary_unit = r'(?P<unit_imag_pre>^|\W)(?P<unit_imag>[+-]?)I(?P<unit_imag_post>$|\W)'


complex_regex = re.compile(''.join([
'(',
only_imag,
'|',
imaginary_unit,
'|',
real_plus_optional_imag,
')',
]))


def complex_match_to_real_and_imag(m: re.Match) -> tuple[str, str]:
"""
Extract real and imaginary part from match

INPUT:

- ``m`` -- match from ``complex_regex``

OUTPUT:

Pair of real and complex parts (as string)

EXAMPLES::

sage: from sage.doctest.check_tolerance import complex_match_to_real_and_imag, complex_regex
sage: complex_match_to_real_and_imag(complex_regex.match('1.0'))
('1.0', '0')
sage: complex_match_to_real_and_imag(complex_regex.match('-1.0 - I'))
('-1.0', '-1')
sage: complex_match_to_real_and_imag(complex_regex.match('1.0 - 3.0*I'))
('1.0', '- 3.0')
sage: complex_match_to_real_and_imag(complex_regex.match('1.0*I'))
('0', '1.0')
sage: complex_match_to_real_and_imag(complex_regex.match('- 2.0*I'))
('0', '- 2.0')
sage: complex_match_to_real_and_imag(complex_regex.match('-I'))
('0', '-1')
sage: for match in complex_regex.finditer('[1, -1, I, -1, -I]'):
....: print(complex_match_to_real_and_imag(match))
('1', '0')
('-1', '0')
('0', '1')
('-1', '0')
('0', '-1')
sage: for match in complex_regex.finditer('[1, -1.3, -1.5 + 0.1*I, 0.5 - 0.1*I, -1.5*I]'):
....: print(complex_match_to_real_and_imag(match))
('1', '0')
('-1.3', '0')
('-1.5', '+ 0.1')
('0.5', '- 0.1')
('0', '-1.5')
"""
real = m.group('real')
if real is not None:
real_imag_coeff = m.group('real_imag_coeff')
real_imag_unit = m.group('real_imag_unit')
if real_imag_coeff is not None:
return (real, real_imag_coeff)
elif real_imag_unit is not None:
return (real, real_imag_unit + '1')
else:
return (real, '0')
only_imag = m.group('only_imag')
if only_imag is not None:
return ('0', only_imag)
unit_imag = m.group('unit_imag')
if unit_imag is not None:
return ('0', unit_imag + '1')
assert False, 'unreachable'


def complex_star_repl(m: re.Match):
"""
Replace the complex number in the match with '*'
"""
if m.group('unit_imag') is not None:
# preserve the matched non-word part
return ''.join([
(m.group('unit_imag_pre') or '').strip(),
'*',
(m.group('unit_imag_post') or '').strip(),
])
else:
return '*'


def check_tolerance_complex_domain(want: MarkedOutput, got: str) -> tuple[str, str]:
"""
Compare want and got over complex domain with tolerance

INPUT:

- ``want`` -- a string, what you want
- ``got`` -- a string, what you got

OUTPUT:

The strings to compare, but with matching complex numbers replaced by asterisk.

EXAMPLES::

sage: from sage.doctest.check_tolerance import check_tolerance_complex_domain
sage: from sage.doctest.marked_output import MarkedOutput
sage: check_tolerance_complex_domain(
....: MarkedOutput('foo:[0.2 + 0.1*I]').update(abs_tol=0.3),
....: 'bar:[0.4]')
['foo:[*]', 'bar:[*]']
sage: check_tolerance_complex_domain(
....: MarkedOutput('foo:-0.5 - 0.1*I').update(abs_tol=2),
....: 'bar:1')
['foo:*', 'bar:*']
sage: check_tolerance_complex_domain(
....: MarkedOutput('foo:[1.0*I]').update(abs_tol=0.3),
....: 'bar:[I]')
['foo:[*]', 'bar:[*]']
sage: check_tolerance_complex_domain(MarkedOutput('foo:0.2 + 0.1*I').update(abs_tol=0.3), 'bar:0.6')
Traceback (most recent call last):
...
sage.doctest.check_tolerance.ToleranceExceededError
"""
want_str = []
for match in complex_regex.finditer(want):
want_str.extend(complex_match_to_real_and_imag(match))
got_str = []
for match in complex_regex.finditer(got):
got_str.extend(complex_match_to_real_and_imag(match))
if len(want_str) != len(got_str):
raise ToleranceExceededError()

# Then check the numbers
want_values = [RIFtol(g) for g in want_str]
want_intervals = [add_tolerance(v, want) for v in want_values]
got_values = [RIFtol(g) for g in got_str]
# The doctest is not successful if one of the "want" and "got"
# intervals have an empty intersection
if not all(a.overlaps(b) for a, b in zip(want_intervals, got_values)):
raise ToleranceExceededError()

# Then check the part of the doctests without the numbers
# Continue the check process with floats replaced by stars
want = complex_regex.sub(complex_star_repl, want)
got = complex_regex.sub(complex_star_repl, got)
return [want, got]
5 changes: 4 additions & 1 deletion src/sage/doctest/control.py
Original file line number Diff line number Diff line change
Expand Up @@ -970,7 +970,7 @@ def expand_files_into_sources(self):
sage: DC = DocTestController(DD, [dirname])
sage: DC.expand_files_into_sources()
sage: len(DC.sources)
12
15
sage: DC.sources[0].options.optional
True

Expand Down Expand Up @@ -1071,13 +1071,16 @@ def sort_sources(self):
sage.doctest.util
sage.doctest.test
sage.doctest.sources
sage.doctest.rif_tol
sage.doctest.reporting
sage.doctest.parsing_test
sage.doctest.parsing
sage.doctest.marked_output
sage.doctest.forker
sage.doctest.fixtures
sage.doctest.external
sage.doctest.control
sage.doctest.check_tolerance
sage.doctest.all
sage.doctest
"""
Expand Down
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