Skip to content

Commit

Permalink
Merge pull request #2 from vaofford/updates_RT607210
Browse files Browse the repository at this point in the history
Updates rt607210
  • Loading branch information
vaofford authored Jan 12, 2018
2 parents d24f82f + d719791 commit 4e0a76d
Show file tree
Hide file tree
Showing 22 changed files with 68 additions and 68 deletions.
2 changes: 1 addition & 1 deletion about.html
Original file line number Diff line number Diff line change
Expand Up @@ -75,7 +75,7 @@ <h2>About Us</h2>
<div class="schoolInfo">
<h2 class="color-1">Wellcome Sanger Institute</h2>
<h3>Researching Neglected Tropical Diseases</h3>
<p>We are scientists at the <a href="http://www.sanger.ac.uk" target="_blank">Wellcome Sanger Institute (WSI)</a>, based at Hinxton, near Cambridge, in the UK. We are researching the biology of a number of the organisms that cause Neglected Tropical Diseases (NTDs).</p>
<p>We are scientists at the <a href="http://www.sanger.ac.uk" target="_blank">Wellcome Sanger Institute</a>, based at Hinxton, near Cambridge, in the UK. We are researching the biology of a number of the organisms that cause Neglected Tropical Diseases (NTDs).</p>
<p>We hope that the findings from our research will further understanding of these organisms so that ultimately vaccines, drugs and intervention strategies can be used to reduce, or even eliminate, the diseases.</p>
<p>These organisms are also fascinating in their own right, often possessing unique and interesting biology, which we hope to learn more about.</p>
<p class="color-3">Follow the link below to find out more about who we are and the scientific research we do at the Wellcome Sanger Institute.</p>
Expand Down
4 changes: 2 additions & 2 deletions blogs/pandemic-on-a-plate.html
Original file line number Diff line number Diff line change
Expand Up @@ -97,7 +97,7 @@ <h2 class="text-center">By <a href="http://www.sanger.ac.uk/people/directory/dom

<div class="col-sm-4 col-xs-12 block">
<div class="blogImage">
<img src="../../img/blogs/daryl-domman.jpg" alt="Daryl Domman, Wellcome Sanger Institute (WSI)" title="Daryl Domman, Wellcome Sanger Institute (WSI)" class="img-rounded img-responsive">
<img src="../../img/blogs/daryl-domman.jpg" alt="Daryl Domman, Wellcome Sanger Institute" title="Daryl Domman, Wellcome Sanger Institute" class="img-rounded img-responsive">
<p class="blogCaption"><a href="http://www.sanger.ac.uk/people/directory/domman-daryl" target="_blank"><em>Daryl Domman, Sanger</em></a></p>
</div>
</div>
Expand All @@ -110,7 +110,7 @@ <h2 class="text-center">By <a href="http://www.sanger.ac.uk/people/directory/dom
<div class="blogContent">
<p>To that end, I traveled to Buenos Aires with Matthew Dorman (a PhD student in our group) to spend a few weeks at the Malbrán Institute, which houses the national microbiology reference laboratories for Argentina. The Malbrán also serves as a “hub” for Latin America where many of the cholera samples from across the region are sent. Plus, we have some fantastic friends and collaborators from there, such as Josefina Campos, who was our host for trip.</p>

<p>While at the Malbrán we worked on a collection of ~500 cholera isolates ranging from the 1990s through the present. We needed to grow the bacteria from storage and then extract the DNA to send back to the Sanger Institute where we can place them into our global phylogenetic tree in order to understand how these isolates were related to each other. It was during this work that I had the full realization that the tiny microbes on these petri dishes literally represented millions of cholera cases and had taken so many lives.</p>
<p>While at the Malbrán we worked on a collection of ~500 cholera isolates ranging from the 1990s through the present. We needed to grow the bacteria from storage and then extract the DNA to send back to the Wellcome Sanger Institute where we can place them into our global phylogenetic tree in order to understand how these isolates were related to each other. It was during this work that I had the full realization that the tiny microbes on these petri dishes literally represented millions of cholera cases and had taken so many lives.</p>
</div>
</div>
</div>
Expand Down
2 changes: 1 addition & 1 deletion blogs/seeing-through-blindness.html
Original file line number Diff line number Diff line change
Expand Up @@ -96,7 +96,7 @@ <h2 class="text-center">By <a href="http://www.sanger.ac.uk/people/directory/ben

<div class="col-sm-4 col-xs-12 block">
<div class="blogImage">
<img src="../../img/blogs/angele-benard.jpg" alt="Ang&egrave;le B&eacute;nard, Wellcome Sanger Institute (WSI)" title="Ang&egrave;le B&eacute;nard, Wellcome Sanger Institute (WSI)" class="img-rounded img-responsive">
<img src="../../img/blogs/angele-benard.jpg" alt="Ang&egrave;le B&eacute;nard, Wellcome Sanger Institute" title="Ang&egrave;le B&eacute;nard, Wellcome Sanger Institute" class="img-rounded img-responsive">
<p class="blogCaption"><a href="http://www.sanger.ac.uk/people/directory/benard-angele" target="_blank"><em>Ang&egrave;le B&eacute;nard, Sanger</em></a></p>
</div>
</div>
Expand Down
Binary file added img/footer/logo-wsi-footer.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file removed img/footer/logo-wtsi-footer.png
Binary file not shown.
6 changes: 3 additions & 3 deletions includes/footer-subdir.html
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@
<div class="row">
<div class="col-sm-6 col-xs-12">
<div class="footerTitle">
<a href="http://www.sanger.ac.uk"><img src="../../img/footer/logo-wtsi-footer.png"></a>
<a href="http://www.sanger.ac.uk"><img src="../../img/footer/logo-wsi-footer.png"></a>
</div>
<div class="footerInfo">
<p><strong>Wellcome Genome Campus</strong> <br /> Hinxton <br />Cambridgeshire <br />CB10 1SA <br /> United Kingdom</p>
Expand All @@ -38,7 +38,7 @@ <h4>Useful Links</h4>
<ul class="list-unstyled footerList">
<li>
<a href="http://www.sanger.ac.uk/science/programmes/infection-genomics">
<i class="fa fa-angle-double-right" aria-hidden="true"></i>WSI Infection Genomics
<i class="fa fa-angle-double-right" aria-hidden="true"></i>Sanger Infection Genomics
</a>
</li>
<li>
Expand Down Expand Up @@ -81,7 +81,7 @@ <h4>Useful Links</h4>
</div>
<div class="col-sm-7 col-sm-pull-5 col-xs-12">
<div class="copyRightText">
<p>© 2017 Copyright Wellcome Trust Sanger Institute</p>
<p>© 2018 Copyright Wellcome Sanger Institute</p>
</div>
</div>
</div>
Expand Down
6 changes: 3 additions & 3 deletions includes/footer.html
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@
<div class="row">
<div class="col-sm-6 col-xs-12">
<div class="footerTitle">
<a href="http://www.sanger.ac.uk"><img src="img/footer/logo-wtsi-footer.png"></a>
<a href="http://www.sanger.ac.uk"><img src="img/footer/logo-wsi-footer.png"></a>
</div>
<div class="footerInfo">
<p><strong>Wellcome Genome Campus</strong> <br /> Hinxton <br />Cambridgeshire <br />CB10 1SA <br /> United Kingdom</p>
Expand All @@ -38,7 +38,7 @@ <h4>Useful Links</h4>
<ul class="list-unstyled footerList">
<li>
<a href="http://www.sanger.ac.uk/science/programmes/infection-genomics">
<i class="fa fa-angle-double-right" aria-hidden="true"></i>WSI Infection Genomics
<i class="fa fa-angle-double-right" aria-hidden="true"></i>Sanger Infection Genomics
</a>
</li>
<li>
Expand Down Expand Up @@ -81,7 +81,7 @@ <h4>Useful Links</h4>
</div>
<div class="col-sm-7 col-sm-pull-5 col-xs-12">
<div class="copyRightText">
<p>© 2017 Copyright Wellcome Trust Sanger Institute</p>
<p>© 2018 Copyright Wellcome Sanger Institute</p>
</div>
</div>
</div>
Expand Down
2 changes: 1 addition & 1 deletion includes/homepage-banner.html
Original file line number Diff line number Diff line change
Expand Up @@ -170,7 +170,7 @@
</li>

<li data-transition="fade" data-slotamount="5" data-masterspeed="700" data-title="Schistosoma mansoni, trematode flatworms known as blood flukes">
<img src="./img/banner/banner-schistosoma-mansoni.jpg" alt="Neglected tropical disease (NTD) - Schistosoma mansoni, trematode flatworms known as blood flukes by David Goulding, Wellcome Sanger Institute (WSI)" data-bgfit="cover" data-bgposition="center center" data-bgrepeat="no-repeat">
<img src="./img/banner/banner-schistosoma-mansoni.jpg" alt="Neglected tropical disease (NTD) - Schistosoma mansoni, trematode flatworms known as blood flukes by David Goulding, Wellcome Sanger Institute" data-bgfit="cover" data-bgposition="center center" data-bgrepeat="no-repeat">
<div class="slider-caption container">
<div class="tp-caption rs-caption-1 sft start text-center"
data-hoffset="0"
Expand Down
4 changes: 2 additions & 2 deletions includes/ntd-seminar.html
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ <h4 class="media-heading color-2">Seminar Date</h4>
</div>
<div class="media-body iconContent">
<h4 class="media-heading color-6">Time</h4>
<p>TBC</p>
<p>12.00 PM - 13.30 PM</p>
</div>
</li>
<li class="media iconContet">
Expand All @@ -38,7 +38,7 @@ <h4 class="media-heading color-3">Contact</h4>
</div>
<div class="media-body iconContent">
<h4 class="media-heading color-5">Location</h4>
<p>TBC</p>
<p>C302 <br> Shared Facilities <br>Hinxton <br> CB10 1SD</p>
</div>
</li>
<li><a href="./seminar.html" class="btn btn-primary bg-color-4 btn-block" title="More Information about about the NTD Seminar">More information</a></li>
Expand Down
2 changes: 1 addition & 1 deletion includes/ntds/bacteria.html
Original file line number Diff line number Diff line change
Expand Up @@ -52,7 +52,7 @@ <h3><a href="./ntds/trachoma.html" class="color-6">Trachoma</a></h3>

<div class="col-sm-3 col-xs-12 block">
<div class="thumbnail thumbnailContent">
<a href="./ntds/typhoid.html"><img src="./img/ntds/thumbnails/typhoid-thumbnail.jpg" alt="Salmonella typhi" title="Salmonella typhi by David Goulding, Wellcome Sanger Institute (WSI)" class="img-responsive"></a>
<a href="./ntds/typhoid.html"><img src="./img/ntds/thumbnails/typhoid-thumbnail.jpg" alt="Salmonella typhi" title="Salmonella typhi by David Goulding, Wellcome Sanger Institute" class="img-responsive"></a>
<div class="caption border-color-6">
<h3><a href="./ntds/typhoid.html" class="color-6">Typhoid</a></h3>
<p><em>Salmonella typhi</em></p>
Expand Down
4 changes: 2 additions & 2 deletions includes/ntds/parasites.html
Original file line number Diff line number Diff line change
Expand Up @@ -38,7 +38,7 @@ <h3><a href="./ntds/leishmania.html" class="color-4">Leishmaniasis</a></h3>
<div class="row">
<div class="col-sm-3 col-xs-12 block">
<div class="thumbnail thumbnailContent">
<a href="./ntds/schistosomiasis.html"><img src="./img/ntds/thumbnails/schistosomiasis-thumbnail.jpg" alt="Schistosoma mansoni" title="Schistosoma mansoni by David Goulding, Wellcome Sanger Institute (WSI)" class="img-responsive"></a>
<a href="./ntds/schistosomiasis.html"><img src="./img/ntds/thumbnails/schistosomiasis-thumbnail.jpg" alt="Schistosoma mansoni" title="Schistosoma mansoni by David Goulding, Wellcome Sanger Institute" class="img-responsive"></a>
<div class="caption border-color-4">
<h3><a href="./ntds/schistosomiasis.html" class="color-4">Schistosomiasis</a></h3>
<p><em>Schistosoma mansoni</em></p>
Expand All @@ -51,7 +51,7 @@ <h3><a href="./ntds/schistosomiasis.html" class="color-4">Schistosomiasis</a></h

<div class="col-sm-3 col-xs-12 block">
<div class="thumbnail thumbnailContent">
<a href="./ntds/trichuriasis.html"><img src="./img/ntds/thumbnails/trichuriasis-thumbnail.jpg" alt="Trichuris muris, a parasitic nematode affecting mice" title="Trichuris muris, a parasitic nematode affecting mice by David Goulding, Wellcome Sanger Institute (WSI)" class="img-responsive"></a>
<a href="./ntds/trichuriasis.html"><img src="./img/ntds/thumbnails/trichuriasis-thumbnail.jpg" alt="Trichuris muris, a parasitic nematode affecting mice" title="Trichuris muris, a parasitic nematode affecting mice by David Goulding, Wellcome Sanger Institute" class="img-responsive"></a>
<div class="caption border-color-4">
<h3><a href="./ntds/trichuriasis.html" class="color-4">Trichuriasis</a></h3>
<p><em>Trichuris trichiura</em></p>
Expand Down
2 changes: 1 addition & 1 deletion ntds/cholera.html
Original file line number Diff line number Diff line change
Expand Up @@ -106,7 +106,7 @@ <h3>Cholera</h3>
</div>
<div class="diseaseHeader bg-color-3">Using pathogen material to do research</div>
<div class="diseaseDetails">
<p class="text-justify">At the <a href="http://www.sanger.ac.uk" target="_blank">Wellcome Sanger Institute (WSI)</a>, we are using the genome sequences of <em>V. cholerae</em> genomes to understand how different outbreaks of cholera are related to one another. This has allowed us to move toward explaining how this disease is moving across the planet. We are also beginning experimental work with <em>V. cholerae</em> to understand what it is that makes specific lineages of <em>V. cholerae</em> capable of causing global epidemics of disease, and what prevents other populations of this bacterium from doing so.</p>
<p class="text-justify">At the <a href="http://www.sanger.ac.uk" target="_blank">Wellcome Sanger Institute</a>, we are using the genome sequences of <em>V. cholerae</em> genomes to understand how different outbreaks of cholera are related to one another. This has allowed us to move toward explaining how this disease is moving across the planet. We are also beginning experimental work with <em>V. cholerae</em> to understand what it is that makes specific lineages of <em>V. cholerae</em> capable of causing global epidemics of disease, and what prevents other populations of this bacterium from doing so.</p>
</div>
<div class="diseaseHeader bg-color-6">Useful links</div>
<div class="diseaseDetails">
Expand Down
2 changes: 1 addition & 1 deletion ntds/etec-infections.html
Original file line number Diff line number Diff line change
Expand Up @@ -117,7 +117,7 @@ <h3>ETEC infections</h3>
<div class="diseaseHeader bg-color-6">Useful links</div>
<div class="diseaseDetails">
<ul class="list-unstyled para-list">
<li><i class="fa fa-external-link-square " aria-hidden="true"></i> Find out more about Sanger research groups working on ETEC and other bacteria <a href="http://www.sanger.ac.uk/science/groups/dougan-group" target="_blank">here</a>.</li>
<li><i class="fa fa-external-link-square " aria-hidden="true"></i> Find out more about research groups at the Wellcome Sanger Institute working on ETEC and other bacteria <a href="http://www.sanger.ac.uk/science/groups/dougan-group" target="_blank">here</a>.</li>
<li><i class="fa fa-external-link-square " aria-hidden="true"></i> Read more about ETEC from the <a href="https://www.cdc.gov/ecoli/etec.html" target="_blank">CDC</a>.</li>
</ul>
</div>
Expand Down
6 changes: 3 additions & 3 deletions ntds/leishmania.html
Original file line number Diff line number Diff line change
Expand Up @@ -112,8 +112,8 @@ <h3>Leishmaniasis</h3>
</div>
<div class="diseaseHeader bg-color-3">Using pathogen material to do research</div>
<div class="diseaseDetails">
<p class="text-justify">The <a href="http://www.sanger.ac.uk" target="_blank">Wellcome Sanger Institute (WSI)</a> has a long history of involvement in understanding the genomes of Leishmania parasites, having been involved in producing the first reference genome major, made public in 2005.</p>
<p class="text-justify">Two major research projects on <em>Leishmania</em> are being done at Sanger:</p>
<p class="text-justify">The <a href="http://www.sanger.ac.uk" target="_blank">Wellcome Sanger Institute</a> has a long history of involvement in understanding the genomes of Leishmania parasites, having been involved in producing the first reference genome major, made public in 2005.</p>
<p class="text-justify">Two major research projects on <em>Leishmania</em> are being done at the Wellcome Sanger Institute:</p>
<ol class="text-justify">
<li>understanding the evolution and diversity of <em>Leishmania</em> by generating whole-genome sequence data from large-scale collections of parasites (including both human cases of disease and animal reservoirs)</li>
<li>identifying <em>Leishmania</em> proteins that might contribute to a protective vaccine for human visceral leishmaniasis</li>
Expand All @@ -123,7 +123,7 @@ <h3>Leishmaniasis</h3>
<div class="diseaseDetails">
<ul class="list-unstyled para-list">
<li><i class="fa fa-external-link-square " aria-hidden="true"></i> Find out more about the author of this page, <a href="http://www.sanger.ac.uk/people/directory/cotton-james" target="_blank">James Cotton</a>.</li>
<li><i class="fa fa-external-link-square " aria-hidden="true"></i> Find out more about parasite genomics at <a href="http://www.sanger.ac.uk/science/groups/berriman-group" target="_blank">Sanger</a>.</li>
<li><i class="fa fa-external-link-square " aria-hidden="true"></i> Find out more about parasite genomics at the <a href="http://www.sanger.ac.uk/science/groups/berriman-group" target="_blank">Wellcome Sanger Institute</a>.</li>
</ul>
</div>
</div>
Expand Down
Loading

0 comments on commit 4e0a76d

Please sign in to comment.