Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
What does this implement/fix? Explain your changes
fixes inf values being returned by the slice_numpy mcmc sampler
Does this close any currently open issues?
Fixes #1060. Also related to #910
Any other comments?
The issue was not in the sampler "diverging", c.f. #910:
Instead, we generated the samples to return initially with
np.empty()
, but did not account for the tuning of the bracket width, so we never defined the first entries of the sampels returned. This is why increasing warm up steps also fixed the issue - the nan values were completely removed if the warm_up steps were increased enough.