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Issue 1359 add sample ids to dynamic and exported tables #1436

Merged
merged 47 commits into from
Jun 28, 2023
Merged

Issue 1359 add sample ids to dynamic and exported tables #1436

merged 47 commits into from
Jun 28, 2023

Commits on Mar 31, 2023

  1. Fix for Single Page

    Kevin De Pelseneer committed Mar 31, 2023
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  2. Merge branch 'master' of github.com:seek4science/seek into issue_1359… 

    …_Add_Sample_IDs_to_dynamic_and_exported_tables
    Kevin De Pelseneer committed Mar 31, 2023
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Commits on Apr 3, 2023

  1. Merge branch 'master' of github.com:seek4science/seek into issue_1359… 

    …_Add_Sample_IDs_to_dynamic_and_exported_tables
    Kevin De Pelseneer committed Apr 3, 2023
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Commits on Apr 19, 2023

  1. Add Axlsx gemfiles

    Kevin De Pelseneer committed Apr 19, 2023
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  2. Added excel template

    Kevin De Pelseneer committed Apr 19, 2023
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Commits on Apr 21, 2023

  1. Fix for autocomplete in dynamic table.

    Kevin De Pelseneer committed Apr 21, 2023
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  2. Removed unnecessary console logging

    Kevin De Pelseneer committed Apr 21, 2023
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  3. Added POST and GET routes under Single Page

    Kevin De Pelseneer committed Apr 21, 2023
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  4. Added button to export excel

    Kevin De Pelseneer committed Apr 21, 2023
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  5. Added UUID to the data for dynamic table

    Kevin De Pelseneer committed Apr 21, 2023
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Commits on Apr 22, 2023

  1. Get rid of renaming warning

    Kevin De Pelseneer committed Apr 22, 2023
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Commits on Apr 26, 2023

  1. - Changed the dynamic table to display the ID and UUID as a read-only… 

    … column.\n- Replaced the download csv file with a download xlsx button.
    Kevin De Pelseneer committed Apr 26, 2023
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  2. Working an the excel template for downloading the dynamic table samples

    Kevin De Pelseneer committed Apr 26, 2023
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Commits on May 3, 2023

  1. Working an the excel template for downloading the dynamic table samples: 

    - Added instance variables
- Made data validation more dynamic
    Kevin De Pelseneer committed May 3, 2023
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  2. Changed the get and post routes from member to collection

    Kevin De Pelseneer committed May 3, 2023
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  3. Added handling of different table names, based on the url.

    Kevin De Pelseneer committed May 3, 2023
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  4. Changed the controller logic for exporting the table to an excel spre… 

    …adsheet:

- Add instance variables
- Caching between requests
- Added error handling
    Kevin De Pelseneer committed May 3, 2023
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  5. Written a functional test for Excel Spreadsheet generation.

    Kevin De Pelseneer committed May 3, 2023
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  6. Merge branch 'master' of github.com:seek4science/seek into issue_1359… 

    …_Add_Sample_IDs_to_dynamic_and_exported_tables
    Kevin De Pelseneer committed May 3, 2023
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  7. Reverted modifications treeview_builder.rb

    Kevin De Pelseneer committed May 3, 2023
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Commits on May 4, 2023

  1. Fixed study id which is passed from the front-end

    @vdkkia
    vdkkia committed May 4, 2023
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Commits on May 9, 2023

  1. Replace the ID and UUID with 'HIDDEN' fields.

    Kevin De Pelseneer committed May 9, 2023
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  2. Added extra checks on the controller side.

    Kevin De Pelseneer committed May 9, 2023
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  3. Adjusted the excel data validation range to the length of the CV term 

    lists.
    Kevin De Pelseneer committed May 9, 2023
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  4. Fixed failing unit tests. 

    columns_count has te be increased by 2 instead of 1 since the uuid
column was added to the aggregated table.
    Kevin De Pelseneer committed May 9, 2023
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  5. Fix for the functional test. Added authorized user to the test.

    Kevin De Pelseneer committed May 9, 2023
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  6. Make the 'FAIRDOM ID' column orderable.

    Kevin De Pelseneer committed May 9, 2023
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Commits on May 10, 2023

  1. Make the data validation accept new input if controlled vocabulary is 

    origating from an ontology.
    Kevin De Pelseneer committed May 10, 2023
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  2. PR change requests

    Kevin De Pelseneer committed May 10, 2023
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Commits on May 14, 2023

  1. - Partially addresses the issue with selected samples. Samples must b… 

    …e selected now. See [issue seek4science#1422](seek4science#1422)

- Excel sheet now shows whether a field is required. Headers have an '*'
  and the the data validation prompt also tells whether the field is
mandatory or optional.
    Kevin De Pelseneer committed May 14, 2023
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Commits on May 15, 2023

  1. Change 'MANDATORY' into 'REQUIRED' in the prompt.

    Kevin De Pelseneer committed May 15, 2023
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  2. Changed to to avoid conflicts in Safari.

    Kevin De Pelseneer committed May 15, 2023
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Commits on May 16, 2023

  1. Move the 'Export to Excel' button to the top.

    Kevin De Pelseneer committed May 16, 2023
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Commits on Jun 12, 2023

  1. Merge branch 'main' of github.com:seek4science/seek into issue_1359_A… 

    …dd_Sample_IDs_to_dynamic_and_exported_tables
    Kevin De Pelseneer committed Jun 12, 2023
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  2. Fix Gemfile after merging with main branch

    Kevin De Pelseneer committed Jun 12, 2023
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  3. Move the export to excel function to index.js

    Kevin De Pelseneer committed Jun 12, 2023
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Commits on Jun 13, 2023

  1. - Fix dynamic table after merge 

    - Make exportToExcel async
    Kevin De Pelseneer committed Jun 13, 2023
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  2. Implementation for exporting an assay table

    Kevin De Pelseneer committed Jun 13, 2023
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  3. Change Factory to FactoryBot

    Kevin De Pelseneer committed Jun 13, 2023
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Commits on Jun 22, 2023

  1. Fix test for exporting source samples to excel

    Kevin De Pelseneer committed Jun 22, 2023
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  2. Adjustments to export functionalities 

    - renamed sample_data
- Making export functionality instance-agnostic
    Kevin De Pelseneer committed Jun 22, 2023
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  3. Writing tests for exporting to excel 

    - Made source sample table test instance-agnostic

- New test for exporting samples from a sample collection table or assay sample table

- format document
    Kevin De Pelseneer committed Jun 22, 2023
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  4. Resolve conflict in Gemfile

    Kevin De Pelseneer committed Jun 22, 2023
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  5. Merge branch 'main' into issue_1359_Add_Sample_IDs_to_dynamic_and_exp… 

    …orted_tables
    @kdp-cloud
    kdp-cloud authored Jun 22, 2023
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  6. Remove dependencies that cause docker build to fail

    Kevin De Pelseneer committed Jun 22, 2023
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  7. Merge branch 'issue_1359_Add_Sample_IDs_to_dynamic_and_exported_table… 

    …s' of github.com:ELIXIR-Belgium/seek into issue_1359_Add_Sample_IDs_to_dynamic_and_exported_tables
    Kevin De Pelseneer committed Jun 22, 2023
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Commits on Jun 28, 2023

  1. Remove unnecessary comment

    Kevin De Pelseneer committed Jun 28, 2023
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