Skip to content
@sib-swiss

SIB Swiss Institute of Bioinformatics

Popular repositories Loading

  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 1k 183

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 80 36

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 64 28

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 58 17

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 45 12

  6. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 40 15

Repositories

Showing 10 of 126 repositories
  • first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    sib-swiss/first-steps-with-python-training’s past year of commit activity
    Jupyter Notebook 58 CC-BY-4.0 17 6 0 Updated Mar 13, 2025
  • resourcex Public
    sib-swiss/resourcex’s past year of commit activity
    R 0 0 0 0 Updated Mar 13, 2025
  • sib-swiss/obelisk-docker’s past year of commit activity
    Shell 0 0 0 0 Updated Mar 13, 2025
  • pyrheadb Public

    Repository for the Python package intended to facilitate access to Rhea data from Python

    sib-swiss/pyrheadb’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Mar 13, 2025
  • single-cell-r-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    sib-swiss/single-cell-r-training’s past year of commit activity
    R 1 CC-BY-4.0 0 0 0 Updated Mar 13, 2025
  • sparql-editor Public

    💫 A standard web component to deploy a user-friendly SPARQL query editor for one or more endpoints. Built on the popular YASGUI editor, it provides context-aware autocomplete for classes and predicates based on the content of the endpoints.

    sib-swiss/sparql-editor’s past year of commit activity
    TypeScript 11 MIT 0 9 0 Updated Mar 12, 2025
  • kgsteward Public

    Knowledge Graph Steward - Command line tool to help manage RDF store

    sib-swiss/kgsteward’s past year of commit activity
    Python 6 GPL-3.0 2 0 0 Updated Mar 12, 2025
  • EPD Public

    The Eukaryotic Promoter Database (EPD) website

    sib-swiss/EPD’s past year of commit activity
    JavaScript 0 GPL-3.0 0 0 0 Updated Mar 12, 2025
  • single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    sib-swiss/single-cell-training’s past year of commit activity
    R 80 CC-BY-4.0 36 2 0 Updated Mar 12, 2025
  • sparql-llm Public

    🦜✨ Chat system and reusable components to improve LLMs capabilities when generating SPARQL queries

    sib-swiss/sparql-llm’s past year of commit activity
    Jupyter Notebook 28 MIT 2 1 0 Updated Mar 12, 2025