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@signalingsystemslab

Signaling Systems Lab

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  1. dMI dMI Public

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  2. Differentiation-process-of-dendritic-cell Differentiation-process-of-dendritic-cell Public

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  3. mRNA-nuclear-export mRNA-nuclear-export Public

    Innate immune response gene expression is regulated by mRNA nuclear export kinetics

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Repositories

Showing 10 of 19 repositories
  • polarized_macs_NFkB_response_dynamics Public

    Code for QC metrics and informative feature calculations as described in Stimulus-Response signaling dynamics characterize macrophage polarization states (Singh et al. 2023)

    signalingsystemslab/polarized_macs_NFkB_response_dynamics’s past year of commit activity
    MATLAB 0 MIT 0 0 0 Updated May 1, 2024
  • mTFP1-cRel_DirectObservationBcells Public
    signalingsystemslab/mTFP1-cRel_DirectObservationBcells’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 9, 2024
  • nfkbktr Public
    signalingsystemslab/nfkbktr’s past year of commit activity
    Python 0 0 0 0 Updated Oct 2, 2023
  • CombinatorialSignalingMacrophages_p38NFkB Public

    Scripts and functions to analyse "Combinatorial and temporal coding by MAPK p38 and NFκB in the inflammatory response of macrophages": Mutual information, stimulus classification by machine learning, dose response analysis, correlations of dynamic features

    signalingsystemslab/CombinatorialSignalingMacrophages_p38NFkB’s past year of commit activity
    MATLAB 0 GPL-3.0 0 0 0 Updated Aug 24, 2023
  • MACKtrack-for-NFkappaB-and-p38-dynamics Public Forked from stefanieluecke/MACKtrack-for-NFkappaB-and-p38-dynamics

    MACKtrack software for automated tracking and fluorescence quantification of live cell microscopy images, based on Brooks Taylor's original code, edited for simultaneous analysis of p38 MAPK and NFkB signaling dynamics

    signalingsystemslab/MACKtrack-for-NFkappaB-and-p38-dynamics’s past year of commit activity
    MATLAB 0 1 0 0 Updated Aug 22, 2023
  • GitGuide Public Forked from aschiffman/GitGuide

    Guide to using git/github for the signaling systems lab

    signalingsystemslab/GitGuide’s past year of commit activity
    0 1 0 0 Updated Mar 1, 2023
  • IFN-GeneRegulation Public
    signalingsystemslab/IFN-GeneRegulation’s past year of commit activity
    MATLAB 0 0 0 0 Updated Feb 1, 2023
  • IFN-signaling Public
    signalingsystemslab/IFN-signaling’s past year of commit activity
    MATLAB 0 0 0 0 Updated Dec 4, 2022
  • ResponseSpecificity Public

    Quantifying macrophage Response Specificity

    signalingsystemslab/ResponseSpecificity’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 6, 2022
  • mRNA-nuclear-export Public

    Innate immune response gene expression is regulated by mRNA nuclear export kinetics

    signalingsystemslab/mRNA-nuclear-export’s past year of commit activity
    R 1 0 0 0 Updated Jul 2, 2022
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