feat: implement WDL 1.2 task evaluation.

Cargo.toml

@@ -54,6 +54,7 @@ rowan = "0.15.15"
 serde = { version = "1", features = ["derive"] }
 serde_json = "1.0.120"
 serde_with = "3.8.1"
+sysinfo = "0.32.1"
 tempfile = "3.10.1"
 tokio = { version = "1.38.0", features = ["full"] }
 toml = "0.8.14"

README.md

@@ -140,6 +140,8 @@ The `wdl` CLI tool currently supports the following subcommands:
 - `format` - Parses, validates, and then formats a single WDL document, printing
   the result to STDOUT.
 - `doc` - Builds documentation for a WDL workspace.
+- `run` - Parses, validates, and then runs a workflow or task from a single WDL
+  document using a local (i.e. not in a container) executor.
 
 Each of the subcommands supports passing `-` as the file path to denote reading
 from STDIN instead of a file on disk.

gauntlet/src/lib.rs

@@ -42,7 +42,6 @@ pub use repository::Repository;
 use wdl::analysis::Analyzer;
 use wdl::analysis::rules;
 use wdl::ast::Diagnostic;
-use wdl::ast::SyntaxNode;
 use wdl::lint::LintVisitor;
 use wdl::lint::ast::Validator;
 
@@ -198,7 +197,7 @@ pub async fn gauntlet(args: Args) -> Result<()> {
         total_time += elapsed;
 
         for result in &results {
-            let path = result.uri().to_file_path().ok();
+            let path = result.document().uri().to_file_path().ok();
             let path = match &path {
                 Some(path) => path
                     .strip_prefix(&repo_root)
@@ -211,20 +210,16 @@ pub async fn gauntlet(args: Args) -> Result<()> {
             let document_identifier =
                 document::Identifier::new(repository_identifier.clone(), &path);
 
-            let diagnostics: Cow<'_, [Diagnostic]> = match result.parse_result().error() {
+            let diagnostics: Cow<'_, [Diagnostic]> = match result.error() {
                 Some(e) => {
                     vec![Diagnostic::error(format!("failed to read `{path}`: {e:#}"))].into()
                 }
-                None => result.diagnostics().into(),
+                None => result.document().diagnostics().into(),
             };
 
             let mut actual = IndexSet::new();
             if !diagnostics.is_empty() {
-                let source = result
-                    .parse_result()
-                    .root()
-                    .map(|n| SyntaxNode::new_root(n.clone()).text().to_string())
-                    .unwrap_or(String::new());
+                let source = result.document().node().syntax().text().to_string();
 
                 let file: SimpleFile<_, _> = SimpleFile::new(
                     Path::new(document_identifier.path())

wdl-analysis/CHANGELOG.md

@@ -15,6 +15,9 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Changed
 
+* Refactored the `AnalysisResult` and `Document` types to move properties of
+  the former into the latter; this will assist in evaluation of documents in
+  that the `Document` alone can be passed into evaluation ([#265](https://github.com/stjude-rust-labs/wdl/pull/265)).
 * Removed the "optional type" constraint for the `select_first`, `select_all`,
   and `defined` functions; instead, these functions now accepted non-optional
   types and analysis emits a warning when the functions are called with
@@ -35,6 +38,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Fixed
 
+* Fixed an issue where imported structs weren't always checked correctly for
+  type equivalence with local structs ([#265](https://github.com/stjude-rust-labs/wdl/pull/265)).
 * Common type calculation now supports discovering common types between the
   compound types containing Union and None as inner types, e.g.
   `Array[String] | Array[None] -> Array[String?]` ([#257](https://github.com/stjude-rust-labs/wdl/pull/257)).