Identification of differential RNA modifications from nanopore direct RNA sequencing
RNA modifications detection from Nanopore dRNA-Seq data
An awesome Oxford Nanopore Pipeline for direct RNA-sequencing
NanoML-5moU: A Machine Learning framework to detect 5mou modification in IVT direct RNA sequencing data
Convert mpileup format to base count tsv table
Nanopore direct tRNA sequencing method refinement and RNA modification benchmarking
Annotates modomics RNA sequences for easy viewing of RNA modifications and nucleotide positions.
handful of tools that might be needed before or after HAMR
📦 Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.
A multiomics approach reveals RNA dynamics promote cellular sensitivity to DNA hypomethylation
A bundle of HAMRtools for High-throughput RNA modification prediction and analysis
Add a description, image, and links to the rna-modifications topic page so that developers can more easily learn about it.
To associate your repository with the rna-modifications topic, visit your repo's landing page and select "manage topics."