Add HISAT2 alignment #229
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Add HISAT2 alignment #229
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added 2 commits
November 14, 2018 15:49
- Supports sinle-end libraries - Uses scramble to convert output from SAM to BAM (use samtools instead?)
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- Add a post-alignment name sort to eliminate a bam12auxmerge failure. - Fastq input files extension has to be ".fq.gz" (and not just ".fq").
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Mar 28, 2022
script to add composition-related metadata to iRODS seq data
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