Skip to content

Issues: DaehwanKimLab/centrifuge

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

127 Open 143 Closed
127 Open 143 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Centrifuge Build failing due to issues with centrifuge-build-bin
#283 opened Oct 29, 2024 by meridiajane
1
Issues with Centrifuge Output for Functional Annotation
#282 opened Aug 12, 2024 by PoojaThummar
2
Viral new File format?
#280 opened Jun 24, 2024 by mwylerCH
4
centrifuge-kreport values do not ad
#276 opened May 22, 2024 by pablorr24
3
nt index incomplete build
#275 opened Apr 2, 2024 by igordot
21
option --packed
#274 opened Mar 28, 2024 by mwylerCH
NCBI nt index
#273 opened Mar 21, 2024 by igordot
6
Can using "--mm" flag reduce memory usage?
#272 opened Mar 4, 2024 by nzx9581
2
Database problem
#270 opened Feb 15, 2024 by ADelacuv
1
M. tuberculosis genome size error
#267 opened Jan 25, 2024 by DOH-KEW4303
not able to build database, taxonomy does not exist warnings, latest version by git
#266 opened Jan 21, 2024 by koppk
1
centrifuge download fails
#263 opened Oct 30, 2023 by ggonnella
2
Error downloading centrifuge databases
#262 opened Sep 2, 2023 by RayanaFeltrin
11
Error when downloading only bacteria version
#260 opened Jul 15, 2023 by dafin678
3
how to make seqid2taxid.map
#259 opened Jun 27, 2023 by DAWNkKim
1
Error when executing centrifuge "Argument list too long"
#258 opened May 25, 2023 by BenjaminJPerry
4
Custom database including only specific organisms for reads separation?
#257 opened Mar 29, 2023 by AMK06-1993
Where are you Sulfobacillus?
#255 opened Feb 9, 2023 by DntBScrdDv
33
Calculate abundance without genome size taken into account
#253 opened Feb 2, 2023 by pjtorres
Unusual abundance results with custom classifier index
#252 opened Feb 1, 2023 by hirosatosd
6
Unable to use sudo make install prefix=/usr/local
#251 opened Dec 23, 2022 by JBriel1
4
Error compiling on macOS ventura
#250 opened Nov 14, 2022 by vicho33
1
Warning: Encountered reference sequence with only gaps
#249 opened Oct 20, 2022 by wittler-github
2
Issues with --nodc, --justref and --noref parameters
#248 opened Oct 12, 2022 by darko-cucin
Classification filtering only virus/archaea sequences
#247 opened Sep 5, 2022 by NINADCROCHA
1
ProTip! Find all open issues with in progress development work with linked:pr.