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105 Open 144 Closed
105 Open 144 Closed
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Issues list

ERROR from search engine (127)
#265 opened Dec 20, 2024 by ilaydagulmez
Clustering step of LTR pipeline fails bug
#260 opened Oct 23, 2024 by sjd028
2
Use of one repeat library for multiple closely related species belonging to the same order? question
#258 opened Oct 2, 2024 by DEYANIK
Edge redefinition errror
#255 opened Sep 16, 2024 by culot007
1
Error in RepeatClassifier step: Missing RepeatPeps.lib.psq bug
#254 opened Aug 5, 2024 by athenasyarifa
1
recover from round-6 question
#252 opened Jul 24, 2024 by XuanZhang-Black
1
RepeatModeler stuck at rmblastn with a small fungal genome at "Refining 2 families" question
#251 opened Jul 21, 2024 by ishengtsai
3
MAFFT failed while running RepeatModeler
#256 opened Jul 15, 2024 by sjd028
@asgray
3
Could not open *.translation file for reading! bug
#248 opened Jul 4, 2024 by FeelLiao
4
Error in Clustering Step of LTR Pipeline bug
#241 opened Mar 25, 2024 by simone-says
5
ERROR from search engine (0) bug
#239 opened Mar 13, 2024 by pure6688
8
Request: LTR_retriever update from version 2.9.0
#257 opened Feb 2, 2024 by ryandkuster
@asgray
1
LTR_retriever failed to generate a file bug
#230 opened Dec 8, 2023 by cyycyj
4
Improving recovery mode bug
#225 opened Nov 22, 2023 by Alteroldis
1
recoveryDir issue bug
#223 opened Nov 17, 2023 by rhysf
Segmentation fault and no recovery possible bug
#222 opened Nov 14, 2023 by RNieuwenhuis
issue with alignAndCallConsensus.pl script bug
#221 opened Oct 25, 2023 by s-travers
Can't locate 'setThreadByQuery' via package "NCBIBlastSearchEngine" at RepeatModeler/Refiner bug
#220 opened Oct 24, 2023 by tania-k
1
build_lmer_table failed. Exit code 65280 bug
#219 opened Oct 17, 2023 by chhhhai
2
FastaDB::compact - Error could not locate file /home/xly/work8/403/repeat/RM_3970586.SunAug270923512023/round-4/sampleDB-4.fa! bug
#216 opened Aug 27, 2023 by YDD99
3
RepeatModeler 2.0.4 results no longer includes "Type=LTR" bug
#212 opened Jun 26, 2023 by piosierra
2
Does -srand <number> option cause RepeatModeler to be deterministic? question
#203 opened Mar 22, 2023 by alankuo1
6
LtrPipeline: GenomeTools failed to run ltrharvest bug
#202 opened Mar 11, 2023 by panpandzf
5
Running Ltr_retriever...Died at /software/RepeatModeler-2.0.4/LTRPipeline line 693. bug
#201 opened Mar 8, 2023 by ShirelyI
11
How to get the loci of the de novo transposable elements from long-read RNA-seq data? question
#200 opened Feb 20, 2023 by Dongxu-Zheng
ProTip! no:milestone will show everything without a milestone.