Bugfix: division by zero in overlaps #1778
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#1765
The issue should primarily be fixed by - Ensembl/ensembl-io#171
But this PR add checks for length to be zero and if so set the overlap percentage to be 100%. This can happen for old VCF format where
INFO/SVLEN
is missing and end position is calculated fromINFO/END
.Test
input.vcf -
custom.vcf -
CMD: