Aliro v0.18

Changelog

• Rebranding: PennAI is now called Aliro.
• Updated NodeJS (version 12.22.9)

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See the documentation at https://epistasislab.github.io/Aliro/ for more instructions.

Requirements:

See the installation instructions for prerequisite software requirements.

Installation:

1. Download the production zip Aliro-0_18.zip from the Assets section below (be sure not to download the source code zip).
2. Unzip the archive

Running:

See Using Aliro for instructions.

• From the command line, navigate to the Aliro directory and run the command docker-compose up to start the Aliro server.
• To stop Aliro, kill the process with ctrl+c and wait for the server to shut down.
• Once the webserver is up, connect to http://localhost:5080/ to access the website.

What's Changed

• Bump socket.io from 2.3.0 to 2.4.0 in /lab by @dependabot in #307
• Fix coveralls in GitHub Action by @weixuanfu in #310
• Unit test runner refactor by @hjwilli in #314
• Regression UI by @hjwilli in #316
• Bump elliptic from 6.5.3 to 6.5.4 in /lab/webapp by @dependabot in #320
• surprise package updates by @lacava in #313
• Bump y18n from 4.0.0 to 4.0.1 in /machine by @dependabot in #322
• Bump y18n from 4.0.0 to 4.0.1 in /lab/webapp by @dependabot in #323
• Bump y18n from 4.0.0 to 4.0.1 in /lab by @dependabot in #321
• Data upload UI tweaks new by @mgstauffer in #317
• Bump ua-parser-js from 0.7.19 to 0.7.28 in /lab/webapp by @dependabot in #324
• Bump browserslist from 4.12.0 to 4.16.6 in /lab by @dependabot in #331
• Bump hosted-git-info from 2.7.1 to 2.8.9 in /lab/webapp by @dependabot in #329
• Bump ws from 3.3.3 to 5.2.3 in /lab by @dependabot in #335
• File upload unit tests2 by @mgstauffer in #330
• Unit testing - add env var-based options for managing which run by @mgstauffer in #332
• Bump hosted-git-info from 2.8.8 to 2.8.9 in /lab by @dependabot in #328
• Bump lodash from 4.17.19 to 4.17.21 in /lab by @dependabot in #326
• Bump socket.io-parser from 3.3.0 to 3.3.2 in /lab/webapp by @dependabot in #338
• Bump lodash from 4.17.19 to 4.17.21 in /lab/webapp by @dependabot in #327
• Bump lodash from 4.17.19 to 4.17.21 in /machine by @dependabot in #325
• Bump glob-parent from 5.0.0 to 5.1.2 in /machine by @dependabot in #333
• Bump ws from 3.3.3 to 5.2.3 in /machine by @dependabot in #334
• Fixed update of dataset page on sibling site instances. by @mgstauffer in #337
• Add dataset prediction type as filter and column on Experiments page by @mgstauffer in #336
• Bump path-parse from 1.0.6 to 1.0.7 in /lab by @dependabot in #340
• shap package update by @hjwilli in #343
• Experiments algo detail view by @mgstauffer in #345
• Aliro rebranding announcement on README.md by @jay-m-dev in #356
• Aliro rebranding by @jay-m-dev in #357
• Rebranding Sphinx docs conf.py and index.rst by @jay-m-dev in #358
• Bump tmpl from 1.0.4 to 1.0.5 in /lab by @dependabot in #344

Full Changelog: v0.17...v0.18