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docs: GEOS paper submittal to JOSS#2886

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rrsettgast wants to merge 166 commits intodevelopGEOS-DEV/GEOS:developfrom docs/JOSSGEOS-DEV/GEOS:docs/JOSSCopy head branch name to clipboard

+982-1

Commits

Commits on Dec 11, 2023

• add sample markdown example from JOSS to test compilation of paper

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• try the github workflow for JOSS

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• add author list, and start summary

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• add author list, and start summary

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• first draft of summary

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Commits on Dec 13, 2023

• some work on the infrastructure section

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• test svg figure insertion

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• test svg figure insertion again

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• test png figure insertion

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• maybe add the files for the figures this time

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Commits on Dec 16, 2023

• some more adds

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Commits on Jan 23, 2024

• Merge branch 'develop' into docs/JOSS

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Commits on Jan 25, 2024

• Merge branch 'develop' into docs/JOSS

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• fix typos in names

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Commits on Mar 21, 2024

• Merge branch 'develop' into docs/JOSS

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Commits on May 8, 2024

• some revisions

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• Merge branch 'develop' into docs/JOSS

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• discussion on coupling physics

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• attempt to put in latex matrix

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• attempt add label to matrix

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Commits on May 9, 2024

• some trimming

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• some more mods

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• some more mods

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Commits on May 13, 2024

• added some authors

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• added some authors...added Frontier figure

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• added figure file

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• removed unknown affiliations

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• removed blank author

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• Adding figure

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• NL strong scaling table

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• merging

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• Formatting table WIP

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• Preliminary NL strong scaling table

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• Trying again

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• Trying again

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• Trying again

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• Trying again

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• Decent formatting

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Commits on May 14, 2024

• Formatting

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• table formatting attempt #125

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• table formatting attempt #126

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• table formatting attempt #127

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• table formatting attempt #128

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• table formatting attempt #129

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• table formatting attempt #130

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• table formatting attempt #131

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• table formatting attempt #132

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• table formatting attempt #133

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• table formatting attempt #134

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• table formatting attempt #135

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• table formatting attempt #136

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• Testing formatting

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• table formatting attempt #136

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• Reverting

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• Reverting

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• table formatting attempt #137

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• table formatting attempt #138

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• table formatting attempt #139

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• apperently HUGE doesn't work

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• try scalebox

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• scalebox doesn't work..duh

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• try without latex

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Commits on May 15, 2024

• some cleanup of text

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• Acknowledgements

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• adding orcid

  

  Lionel Untereiner

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• added figures and some discussion

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• fixed typo

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• file name change

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• reduce figure sizes

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• change figure sizes

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• try putting figures in table

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• revert figures arrangement out of tables

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• revert figures arrangement to be independent

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• Updating figure

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Commits on May 16, 2024

• change some file names, and add more discussion. still around 1070 words including acknowledgements

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• Polishing figure

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• actually include the discussion

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• Updating hypre reference

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• Polishing image

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• Reference

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• Caption

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• Cleaning

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• Cleaning

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• Finalizing figures

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• Fixing reference

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• Consistent referece formatting

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• Fixing refs

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• Fixing refs

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• Fixing refs

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• Fixing refs

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• Cleaning

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• Cleaning

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• added reference to IPCC_2023

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• Co-authors

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• Too many curly brackets in bib entry

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• Refs

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• Authors

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• Conflict

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Commits on May 17, 2024

• some cutting

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• Updating figure

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• Refs

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• Image

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Commits on May 20, 2024

• Acknowledgment update

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• References

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• fix compilation error in paper.md

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• add to author list

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• some edits

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• Trying RTD ref

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• Trying RTD ref

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• Fixing figure ref

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• Removing reference to github

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• CO2 with subscript

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• Update src/docs/JOSS/paper.md

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• C++

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• replace html subscript with markdown subscript

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• Trilinos ref

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• Trilinos ref

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• Refs

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Commits on May 21, 2024

• GEOS-2024

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• some edits

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• Update paper.md

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Commits on May 24, 2024

• Rephrasing

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Commits on May 26, 2024

• some author list changes

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Commits on May 28, 2024

• cleanup author list. add LLNL release number

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Commits on Jun 4, 2024

• multi-affiliation with quotes

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• Update scaling figure

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• Grammar + increase font sizes in the new figure

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• Tweak font size again

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Commits on Jun 5, 2024

• Change to solid lines

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Commits on Jun 6, 2024

• Update text and figure with GPU-aware results

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• Fix LaTeX syntax

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• Fix LaTeX syntax

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Commits on Jun 7, 2024

• typos

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Commits on Jun 12, 2024

• add author

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Commits on Aug 20, 2024

• update statetment of need to include more context and similar projects

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Commits on Aug 23, 2024

• changes based on reviews

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Commits on Aug 30, 2024

• update my affiliations

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• add statement referring to the frontier benchmarks on the GEOS documentation pages

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• use permanant link for perforamanceBenchmarks

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Commits on Sep 1, 2024

• add live links in text

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Commits on Sep 5, 2024

• changed title and added reference to performance portable

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• fix a typo

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Commits on Sep 6, 2024

• Bib formatting

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Commits on Sep 9, 2024

• address first round of editor comments

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• minor change

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Commits on Sep 16, 2024

• modify formatting of dumu bibtex entry

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• Merge branch 'docs/JOSS' of github.com:GEOS-DEV/GEOS into docs/JOSS

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• modify formatting of dumu bibtex entry

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• fix doi for OPM reference

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• Merge branch 'develop' into docs/JOSS

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• update author list with quite a few orcid-ids

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• fix typo in orcid id

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Commits on Sep 17, 2024

• add some more orcid ids

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• add some more orcid ids

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Commits on Sep 18, 2024

• add lionels orcid

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Commits on Sep 20, 2024

• Make scaling figure consistent with documentation + Add python script to generate scaling the figure

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• Remove old scaling plots

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