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Release/v 1.3.0#1298

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shuds13 merged 104 commits intomainLibensemble/libensemble:mainfrom release/v_1.3.0Libensemble/libensemble:release/v_1.3.0Copy head branch name to clipboardMay 1, 2024

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Commits on Mar 20, 2024

• Refactor/user function handling modules + Manager can run additional worker on thread (#1216)

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Commits on Mar 21, 2024

• Trial of sphinx spellcheck

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• Adding spelling to a few places... not sure if all are needed

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• sort

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• Uncommenting out

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• Ensure test_libE_main.py included in coverage

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• Merge pull request #1270 from Libensemble/formatting/sphinx_spellcheck

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• Ensure _adjust_procs is covered in tests

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Commits on Mar 22, 2024

• Test MSMPI in test_mpi_gpu_settings.py

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• Replace Sunspot with Aurora in test_mpi_gpu_settings.py

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• Remove separate get_mpi_specs funciton for jsrun

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• Add test of exception with machinefile

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• Improve mpi_runner coverage

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• Add GPUs run-line tests for coverage

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Commits on Mar 24, 2024

• Remove redundant conditionals in mpi_runner

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• Update _adjust_procs

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• Add missing function in __all__

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Commits on Mar 25, 2024

• Fixing issue with start/end crossrefs

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• Merge pull request #1272 from Libensemble/docs/crossref_bugfix

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• Just letting the package handle code spellcheck

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• remove deprecated environment.yml previously used for rtd, bump a bunch of testing dep versions

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• Bump pytest-cov from 4.1.0 to 5.0.0

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• Merge pull request #1275 from Libensemble/dependabot/pip/develop/pytest-cov-5.0.0

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Commits on Apr 1, 2024

• Bump crate-ci/typos from 1.19.0 to 1.20.0

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• Adjusting typos dictionary

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Commits on Apr 3, 2024

• Bump globus-compute-sdk from 2.15.0 to 2.17.0

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Commits on Apr 4, 2024

• Remove redundant lines from node_resources

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• Removing spelling so latexpdf builds

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• Merge pull request #1279 from Libensemble/dependabot/pip/develop/globus-compute-sdk-2.17.0

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• Merge pull request #1277 from Libensemble/dependabot/github_actions/develop/crate-ci/typos-1.20.0

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• Merge pull request #1274 from Libensemble/cleanup/remove_old_configs

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• Bump matplotlib from 3.8.3 to 3.8.4

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• Merge pull request #1281 from Libensemble/release/v_1.2.2

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• Add +dev to version

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• Bump crate-ci/typos from 1.20.0 to 1.20.4

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• Merge pull request #1282 from Libensemble/dependabot/github_actions/develop/crate-ci/typos-1.20.4

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• Improve node_resources unit testing

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• Remove caplog test - does not work in CI

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• Add diff cores test without logging check

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Commits on Apr 5, 2024

• Fix docstring

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• Update executor testing and dry_run logic

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Commits on Apr 6, 2024

• Merge pull request #1280 from Libensemble/dependabot/pip/develop/matplotlib-3.8.4

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• Formatting changes to README (#1278)

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Commits on Apr 8, 2024

• Add executor unit tests

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• Restructure so coverage works when only run unit tests

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• Remove task in test_serial_exe_exception

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Commits on Apr 9, 2024

• Change OpenMPI to one node

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• Fix procs_per_node

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• Bump crate-ci/typos from 1.20.4 to 1.20.6

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• Merge pull request #1284 from Libensemble/dependabot/github_actions/develop/crate-ci/typos-1.20.6

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• Merge pull request #1273 from Libensemble/formatting/removing_codespell

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Commits on Apr 10, 2024

• Bump crate-ci/typos from 1.20.6 to 1.20.7

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• Merge pull request #1285 from Libensemble/dependabot/github_actions/develop/crate-ci/typos-1.20.7

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• Bump globus-compute-sdk from 2.17.0 to 2.18.0

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Commits on Apr 11, 2024

• Remove duplicate poll - happens in task.kill

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• Add unit test for manager signal exceptions

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• Make test prints consistent in test_executor.py

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• Merge pull request #1286 from Libensemble/dependabot/pip/develop/globus-compute-sdk-2.18.0

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• Fix test for printing TimeoutExpired

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• Bump globus-compute-sdk from 2.18.0 to 2.18.1

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• Merge pull request #1271 from Libensemble/testing/improve_coverage

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Commits on Apr 12, 2024

• Merge pull request #1287 from Libensemble/dependabot/pip/develop/globus-compute-sdk-2.18.1

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• Determining if a fixed version of ax-platform is needed

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• Determining if ax-platform works on 3.12

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Commits on Apr 15, 2024

• Bump crate-ci/typos from 1.20.7 to 1.20.8

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• Merge pull request #1288 from Libensemble/dependabot/github_actions/develop/crate-ci/typos-1.20.8

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Commits on Apr 16, 2024

• Bump crate-ci/typos from 1.20.8 to 1.20.9

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• Merge pull request #1289 from Libensemble/dependabot/github_actions/develop/crate-ci/typos-1.20.9

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Commits on Apr 22, 2024

• Default rsets assigned to -1

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• Modify unit tests for -1 rset init

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• Merge pull request #1290 from Libensemble/bugfix/gen0_resources

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• try no longer downloading/installing old sdks, bump mpich version on macos jobs

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• avoid tasmanian on macOS jobs

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• forgot to remove old-sdk install from extra.yml

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Commits on Apr 23, 2024

• Merge pull request #1292 from Libensemble/testing/update_macos_jobs

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• Merge branch 'develop' into testing/simplify

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Commits on Apr 24, 2024

• Merge pull request #1294 from Libensemble/testing/simplify

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• Testing/update ax dep (#1291)

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• testing/update ax dep (#1291)

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• Bump crate-ci/typos from 1.20.9 to 1.20.10

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• Merge pull request #1295 from Libensemble/dependabot/github_actions/develop/crate-ci/typos-1.20.10

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Commits on Apr 25, 2024

• Merge branch 'develop' of https://github.com/Libensemble/libensemble into develop

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• Bump globus-compute-sdk from 2.18.1 to 2.19.0

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• Merge pull request #1296 from Libensemble/dependabot/pip/develop/globus-compute-sdk-2.19.0

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• Default to local comms when nworkers is set and no MPI environment detected (#1169)

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Commits on Apr 26, 2024

• Prep v1.3.0 release

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• Update Polaris instructions

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Commits on Apr 29, 2024

• Update docs for default comms

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• Fixing indent

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• isort and black

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• whitespace

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• Add gen_on_manager documentation

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• Merge branch 'release/v_1.3.0' of github.com:Libensemble/libensemble into release/v_1.3.0

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• Make gen_on_manager consistent in docs

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• remove 404'd "WarpX + libEnsemble scripts" link

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Commits on Apr 30, 2024

• Add gen on manager option to forces tutorial

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• Link to parse_args function

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• Update links to parse_args

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Commits on May 1, 2024

• Prep v1.3.0 release

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• Update CHANGELOG.rst

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• Update libE_specs.rst

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• Update running_libE.rst

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• Update running_libE.rst

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• clarifying

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