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@RIKEN-BCIL

RIKEN - Brain Connectomics Imaging Laboratory

Codes and pipelines for brain imaging analysis

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  1. NoddiSurfaceMapping NoddiSurfaceMapping Public

    Optimized cerebral cortical surface mapping of neurite properties using diffsion magnetic resonace imaging (dMRI)

    Shell 13 7

  2. dti_preprocess dti_preprocess Public

    Shell 6 2

  3. HCPstyle-BOLDLagMappingAndCleaning HCPstyle-BOLDLagMappingAndCleaning Public

    Pipeline for extraction and removal of the perfusion lag structure within 4D BOLD-fMRI data in HCP-style protocols

    MATLAB 4

  4. NHPPipelines_old NHPPipelines_old Public

    Forked from Washington-University/NHPPipelines

    Enhancements of HCP Pipelines for non-human primates

    Shell 3 2

  5. BCILDCMCONVERT BCILDCMCONVERT Public

    Python 3 1

  6. BOLDLagMapping BOLDLagMapping Public

    Extraction and removal of the time-lag structure within 4D blood oxygenation level dependent (BOLD) signal MRI data

    2 1

Repositories

Showing 10 of 11 repositories
  • HCPpipelinesNHPmerge Public Forked from Washington-University/HCPpipelines

    Processing pipelines for the HCP

    RIKEN-BCIL/HCPpipelinesNHPmerge’s past year of commit activity
    Shell 0 275 0 1 Updated Dec 10, 2024
  • bcil Public

    Brain Connectomics Imaging Library

    RIKEN-BCIL/bcil’s past year of commit activity
    Shell 0 1 0 0 Updated Oct 4, 2024
  • HCPstyle-BOLDLagMappingAndCleaning Public

    Pipeline for extraction and removal of the perfusion lag structure within 4D BOLD-fMRI data in HCP-style protocols

    RIKEN-BCIL/HCPstyle-BOLDLagMappingAndCleaning’s past year of commit activity
    MATLAB 4 0 0 0 Updated Sep 17, 2024
  • BOLDLagMapping Public

    Extraction and removal of the time-lag structure within 4D blood oxygenation level dependent (BOLD) signal MRI data

    RIKEN-BCIL/BOLDLagMapping’s past year of commit activity
    2 1 0 0 Updated Sep 4, 2024
  • RIKEN-BCIL/BCILDCMCONVERT’s past year of commit activity
    Python 3 1 1 0 Updated May 31, 2024
  • HCPpipelinesNHP Public Forked from Washington-University/HCPpipelines

    Processing pipelines for the HCP

    RIKEN-BCIL/HCPpipelinesNHP’s past year of commit activity
    Shell 0 275 0 0 Updated Sep 23, 2023
  • HCPpipelines Public Forked from Washington-University/HCPpipelines

    Processing pipelines for the HCP

    RIKEN-BCIL/HCPpipelines’s past year of commit activity
    Shell 0 275 0 0 Updated Sep 18, 2023
  • NoddiSurfaceMapping Public

    Optimized cerebral cortical surface mapping of neurite properties using diffsion magnetic resonace imaging (dMRI)

    RIKEN-BCIL/NoddiSurfaceMapping’s past year of commit activity
    Shell 13 7 0 0 Updated May 16, 2023
  • RIKEN-BCIL/MultimodalRigidTransform’s past year of commit activity
    Python 1 0 0 0 Updated Mar 27, 2022
  • RIKEN-BCIL/dti_preprocess’s past year of commit activity
    Shell 6 2 0 0 Updated Aug 14, 2021

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