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28 Open 96 Closed
28 Open 96 Closed
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Issues list

Adapting GenePairFinder to identify gene pairs with divergent expression in a pair of clusters?
#154 opened Oct 15, 2024 by laracbusby
problem in intetpreting the SAMap integration results
#152 opened Sep 16, 2024 by GGboy-Zzz
2
How SAMap deal with species-specific cell types/clusters in integration?
#151 opened Jul 9, 2024 by DiracZhu1998
'coo_matrix' object has no attribute 'A'
#150 opened Jul 8, 2024 by dnjst
dendrogram calculation issue
#149 opened Jul 5, 2024 by DiracZhu1998
ImportError: cannot import name 'get_cmap' from 'matplotlib.cm'
#148 opened May 21, 2024 by kelsell15
3
How to process the raw h5ad?
#146 opened Apr 19, 2024 by jordan841220
3
Bug to run the SAMap algorithm
#145 opened Apr 18, 2024 by xiangyuma1995
9
Export SAMap pairs results to Seurat
#144 opened Apr 18, 2024 by silvainp
conda install: can't import samap
#137 opened Dec 21, 2023 by jowodo
1
Tagging Version
#136 opened Dec 21, 2023 by jowodo
Reproducibility and seeding
#135 opened Dec 11, 2023 by dariotommasini
1
Combined umap for 1 cell lineage, retrieving latent representation
#134 opened Nov 20, 2023 by nhgopee
sankey and chord plot error
#133 opened Nov 9, 2023 by dsb66
12
installing issues
#132 opened Nov 8, 2023 by stevenjblair
how sankey_plot show more than four species
#130 opened Nov 4, 2023 by xmChen090
7
sankey_plot error
#128 opened Nov 2, 2023 by zEpoch
5
error in runing map_genes.sh
#127 opened Oct 25, 2023 by rdf1993
1
Question about neigh_from_keys parameter
#126 opened Oct 5, 2023 by Bassi-git
1
"ValueError: could not convert string to float" in convert_eggnog_to_homologs()
#125 opened Sep 29, 2023 by Zaffe24
1
Mapping scores on edges
#123 opened Sep 18, 2023 by DinithiRajapaksha
get_mapping_scores() for cell types within same species non-zero
#121 opened Aug 25, 2023 by dnjst
1
Multi-species cell type network plot
#119 opened Jul 20, 2023 by dnjst
1
Gene Pair Finder Giving "ValueError: negative dimensions are not allowed"
#118 opened Jul 13, 2023 by acgarretson
2
UMAP looks like a line when neighborhood size was determined by using cell type labels
#117 opened Jul 3, 2023 by Evenlyeven
5
ProTip! What’s not been updated in a month: updated:<2024-11-03.