Skip to content

Navigation Menu

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

broadinstitute / CellBender Public

Notifications You must be signed in to change notification settings
Fork 56
Star 303

Code
Issues 139
Pull requests 4
Actions
Projects 1
Security
Insights

Additional navigation options

Code
Issues
Pull requests
Actions
Projects
Security
Insights

Fix major bug in v0.3.1: negative counts#347

Merged

sjfleming merged 17 commits intodevbroadinstitute/CellBender:devfrom sf-negative-count-bug-fixbroadinstitute/CellBender:sf-negative-count-bug-fixCopy head branch name to clipboard

Apr 11, 2024

+126-26

Conversation Commits17 (17)Checks Files changed

Commits

Commits on Apr 5, 2024

Update gitignore
sjfleming
committed
Github actions run on master and dev PRs only
sjfleming
committed
issue #348 lxml_html_clean dependency
sjfleming
committed
Fix #306 : noise count integer overflow
sjfleming
committed
Make dtypes more explicit
sjfleming
committed
Unit test that fails before fix
sjfleming
committed
integration test for negative outputs: also fails before fix
sjfleming
committed
Conversion to torch was a problem from uints
sjfleming
committed
Correct a test that was unfairly failing when gene dtype was int32
sjfleming
committed

Commits on Apr 9, 2024

More informative print statement in test
sjfleming
committed
Failsafe to ensure no negative entries in output
sjfleming
committed

Commits on Apr 10, 2024

Introduce --force-use-checkpoint for redoing v0.3.1 runs
sjfleming
committed
Add a warning to the README about v0.3.1
sjfleming
committed
rst warning does not render in github readme
sjfleming
committed
Another attempt at rst rendering
sjfleming
committed
Add the word "warning"
sjfleming
committed
Fix test failure introduced by --force-use-checkpoint
sjfleming
committed

Footer

© 2024 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.